Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03382 ATGTCTAACTCACACttaattttctgttttctttCTTGCATTCTTGCTCTCACTTTgatcttcatctttttcatcaAAAGTAAGAAAACAAAGTTTAATCTTCCACCTGGAAAAATGGGATGGCCCTTTATTGGAGAAACCATTGGTTATTTGAAGCCTTATTCTGCCACCACAATGGGAGAATTTATGGAAAATCACATAGCAAGGTATGGTACAATTTACAAGTCAAAATTGTTTGGAGGACCAGCTATTGTATCAGCAGATGCAGAATTTAACAGATTCATATTACAAAATGATGGAAAATTATTTGAGTGTAGCTATCCTAGAAGCATTGGTGGAATACTTGGAAAATGGTCAATGTTGGTTTTAGTAGGTGACATGCATAGGGACATGAGGAATATTTCACTAAATTTTATGAGCTATGCTAGACTTAAGACACATTTTTTGAAAGATATAGAGAATCACACTCTTTTGGTTCTAAGCTCTTGGAAAGAAAATTCTACATTCTCAGCTCAAGGTGAAGCAAAAAAGTTCACCTTCAATTTGATGGCCAAACAAATTATGAGTTTGGAACCAGGGAATCTTGAGACAGAACAGTTGAAAAAAGAGTATGTCTCTTTCATGAAAGGTGTTGTTTCTGCTCCTTTAAATTTGCCAGGAACTGCATACAGAAAAGCATTAAAGTCTAGGAAGACCATATTGAAGTTCATAGAGAagaaaatggaagaaagaagCAAGAGAAAccaagaaggaaaaaaagtgTTGGAAGAAAATGATCTTCTAAATTGGGTTCTAAAGCATTCAAATCTTTCCAATGAGCAAATTCTTGACTTGATTCTTAGCTTGCTTTTTGCTGGCCATGAAACTTCATGTGTAGCTATATCTCTAgctatttattttttgcctaGTTGTCCTCGAGCCATAAAGCAATTAAGGGAAGAACATAGAGAAATAGCCAGATCCAAGAAGAAAGCAGGGGAAGTTGGATTAACTTGGGATGATTATAAAAGAATGGAATTTACTCATTGTGTTGTGAATGAAACACTAAGGTTGGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCTATCAAAGATGTTCAGTACAAAGGTTATGACATTCCATGTGGATGGAAAGTACTTCCGGTGATTTCAGCTGTGCATTTGGATCCTTCAAATTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGGGAAATAGTAAAAGTGGAAATTGTGCAAACACAAGCAATAATTTGATGCCATTTGGAGGAGGACCAAGACTATGTGCAGGATCAGAGTTAGCTAAACTTGAAATGGCTGTTTTCATTCATCATATTATCCTCAACTACAATTGGAACCTGGTTGATGTTGATCATCCTGTTGTATACCCTTTTGTTGATTTTCCTAAAGGTTTACCTATTAGAGTCCAAAGCCAATGCCACTCTTTAATATGA 1458 0.3422 MSNSHLIFCFLSCILALTLIFIFFIKSKKTKFNLPPGKMGWPFIGETIGYLKPYSATTMGEFMENHIARYGTIYKSKLFGGPAIVSADAEFNRFILQNDGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRNISLNFMSYARLKTHFLKDIENHTLLVLSSWKENSTFSAQGEAKKFTFNLMAKQIMSLEPGNLETEQLKKEYVSFMKGVVSAPLNLPGTAYRKALKSRKTILKFIEKKMEERSKRNQEGKKVLEENDLLNWVLKHSNLSNEQILDLILSLLFAGHETSCVAISLAIYFLPSCPRAIKQLREEHREIARSKKKAGEVGLTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKAIKDVQYKGYDIPCGWKVLPVISAVHLDPSNFDQPQHFNPWRWQGNSKSGNCANTSNNLMPFGGGPRLCAGSELAKLEMAVFIHHIILNYNWNLVDVDHPVVYPFVDFPKGLPIRVQSQCHSLI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03382 485 Pfam Cytochrome P450 35 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PANTHER CYTOCHROME P450 90B1 16 457 - -
Tsu04g03382 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Tsu04g03382 485 SUPERFAMILY Cytochrome P450 31 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 Gene3D Cytochrome P450 24 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g03382 485 PANTHER CYTOCHROME P450 26 16 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03382 Tsu-Chr4 42981047 42987995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03382 26 409 Cytochrome P450 AT3G50660 71.852 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03382 K09587 - gmx:100789515 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03382 04 42981047 42987995 Tsu04g03382 04 42981047 42987995 ECH
Tsu05g00736 05 6209937 6212425 Tsu04g03382 04 42981047 42987995 PCT