Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03372 ATGGGTGTCGTACGAGTCCTCTCCACGGATACAATCAAGGCACTAAAATCAAGTGATCATGAAATAGATTTGACGCCATGGGATCTTCGGTTTCTACTTGCTTCATCCAACAAAAAGGGTCTTCTTTATCACCATCAAGTAGCGGCAAACCAAATCCAACGGCTGAAACACTCTTTATCCTCCGCCCTTGCCTTTTTCCAACCTCTTGCAGGCCGTCTCAAAATAACGGAACACAGAGACCACATGGTCTCGTGTTCCGTAACATGCAACAATGCAGGTGTGCTCTTTATCCACGCGATAGCAGAGAATACCTTTGTTGCTGACATTCTAGAACCCATCTACGTTCCTCCAATTGTCGATTCACTTTTTGCTTTCATCGGAGTTAATAACTATGAAGGCACATCAAAACCATTGTTAGGAGTTCAAGTCACGGAGCTAGTTGACGGCGTCTTTATTGGTTGCACATTCAACCATGTTGTTGTTGACGGAAAGTCATTGTGGCATTTCATCAATTCATGGGCTGAAATTTCACGCAATTGTTGTCATCACCAAATAAGAAAACTCCCAACACTCGAGCGTTGGTTTCCAAATGATATTCAACGTCCCATACAATTTTCTTTCAGTATGGAGccgcaaaagaatcaatttgaTGACGAAAAAATCTATTTATCAGAGAGGGTATTCCACTTCACAAAGGAGAAAATCACACAACTGAAATCAAAAGTCAATGCAAAGACTAGTACCATCAAAATATCTTCCCTACAAGCGCTTTTAACTCACCTTTGGTGCTCCGTGATCCGTTCCAAACAAGTTGACCCTCAAGAAGAAGTCCATAATATTTTCGTTATAGGAGTTAGACCGAGATTTGTTCCACCATTACCAGAAGATTATTTTGGTAACGCAGTTGTAACTTGTGTGGTTAAAATGAAAGCCGGGGAGTTGTTGGAGGAAGGTGGACTTTATAAAGGCGCTTGCGAGATGAACAAGTTAATTGCTTCACATTCTGATGAAAAGTTGAAGAATCAATACGAGTCTTGGTTAAGAAATCCAACCTTTGTTAGGCAAGCTAGCACGACCgataataatttcttaatcaTTAGCAGTTCTCCTTGGTTTGATGTTTATGGTAATGATTTCGGATGGGGAAAACCCGTGGCAGTTCGTAGtggatataaaataaatggatttGTTAGTGTCTTTGCTGGAATAGAAGAAGGCAGTATAGACCTTCAAGTGTGTCTTCCTTACAAGATTTTGGAGGCAATGGGAAATGACCTTCAATTCATGGATGTTGTGTTCAATTAA 1305 0.3946 MGVVRVLSTDTIKALKSSDHEIDLTPWDLRFLLASSNKKGLLYHHQVAANQIQRLKHSLSSALAFFQPLAGRLKITEHRDHMVSCSVTCNNAGVLFIHAIAENTFVADILEPIYVPPIVDSLFAFIGVNNYEGTSKPLLGVQVTELVDGVFIGCTFNHVVVDGKSLWHFINSWAEISRNCCHHQIRKLPTLERWFPNDIQRPIQFSFSMEPQKNQFDDEKIYLSERVFHFTKEKITQLKSKVNAKTSTIKISSLQALLTHLWCSVIRSKQVDPQEEVHNIFVIGVRPRFVPPLPEDYFGNAVVTCVVKMKAGELLEEGGLYKGACEMNKLIASHSDEKLKNQYESWLRNPTFVRQASTTDNNFLIISSSPWFDVYGNDFGWGKPVAVRSGYKINGFVSVFAGIEEGSIDLQVCLPYKILEAMGNDLQFMDVVFN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03372 434 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 432 - -
Tsu04g03372 434 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 432 - -
Tsu04g03372 434 Gene3D - 205 424 IPR023213 -
Tsu04g03372 434 Gene3D - 3 203 IPR023213 -
Tsu04g03372 434 Pfam Transferase family 6 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03372 Tsu-Chr4 42903798 42905560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03372 53 414 Monolignol Biosynthesis Gene Families AT5G48930 26.893 5.91e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03372 - - mtr:MTR_4g022760 590.112