Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03351 ATGGACCAAGCCGAATTAACCACCGATCAGGTTCTGACTAGGGATATCCCATGGGAAACCTACATGTCCACCAAGCTGATTTCTGGAACAAGCCTTCAACTCTTAAGGCGCTACGATCATCGATCAGAAAGTCAAAGAGCACAGTTGCTTGATGATGATGGTCCGGCTTATGTTCGTGTGTTTGTTCGTGTTTTGCGCGATATTTTCAAGGAGGATACTGTAGAGTATGTTTTGGCTTTGATAGATGAAATGCTGACAGCGAACCCGAAAAGAGCTAGACTGTTTCATGACAATGCCCTTGCGGATGATGATACTTATGAGCCTTTCCTAAGAAATTGGTTCGTACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTTAGTGTCAGGCCAAAAAATCAGAGTGGCGTTGCTTCAAATGGagaagcttcaaatgaaaagaAACCGTTTACCAGCATCGATGATGTTTTGATAGGATTGGTAAAATGGCTTTGTGAGCAGCTGAAGAAACCTTCTCATCCTACTCGTGGAGTTCCAACTGCTATCAATTGCTTATCAACTCTACTTAAGGAACCTGTAGTTAGGTCTTCTTTTGTTCAAGCTGATGGCGTCAAGTTGCTTGTGCCACTGATTTGTCCAGCATCCACTCAACAATCTATTCAGCTTCTTTATGAAACATGTCTCTGCATATGGCTCCTATCATATTATGAGCCCGCAATTGAATATTTGGCTACTTCAAGGACCCTTCCAAGACTGATTGAGGTTGTTAAGAGTTCTACAAAAGAAAAGGTTGTTAGAGTTGTTGTCTTGACACTTAAAAACTTGCTGTCAAAAGGGACATTGGGTGCTCAGATGGTTGATCTTCAGCTGCCACAAGTTGTTCAAAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTGAACTCTTTGGAAGAAGGGCTTAAGGATAACATCAAGAAACTAAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTTCTCGGCAATCTGGATTGGTCTCCAATGCACAAAGATCCCATATTTTGGCGGGAAAATATAACCAGTTTTGAAGAGCATGATTTCCAGATTCTAAGGGTCCTGTTAACAATTTTGGACACGTCCAATGATCCAAGGACTCTAGCTGTTGCTTGCTTTGACATTTCACAGTTCATCCAGAGCCATCCGGCTGGGCGGATCATTGTGACAGACCTTAAAGCCAAGGAACGAGTGATGAAACTTATGAATCATGAGAGTGCTGAGGTAACTAAAAATGCACTGCTCTGCATCCAACGACTTTTCTTGGGTGCAAAGTATGCAAGCTTCTTGCAGGTCTAG 1344 0.4167 MDQAELTTDQVLTRDIPWETYMSTKLISGTSLQLLRRYDHRSESQRAQLLDDDGPAYVRVFVRVLRDIFKEDTVEYVLALIDEMLTANPKRARLFHDNALADDDTYEPFLRNWFVQEKSCKILALIVSVRPKNQSGVASNGEASNEKKPFTSIDDVLIGLVKWLCEQLKKPSHPTRGVPTAINCLSTLLKEPVVRSSFVQADGVKLLVPLICPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRTLPRLIEVVKSSTKEKVVRVVVLTLKNLLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGNLDWSPMHKDPIFWRENITSFEEHDFQILRVLLTILDTSNDPRTLAVACFDISQFIQSHPAGRIIVTDLKAKERVMKLMNHESAEVTKNALLCIQRLFLGAKYASFLQV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03351 447 Pfam V-ATPase subunit H 324 436 IPR011987 GO:0000221|GO:1902600
Tsu04g03351 447 Gene3D - 4 326 IPR011989 -
Tsu04g03351 447 Pfam V-ATPase subunit H 4 318 IPR004908 GO:0000221|GO:0046961|GO:1902600
Tsu04g03351 447 Gene3D - 339 439 IPR038497 -
Tsu04g03351 447 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 446 - -
Tsu04g03351 447 SMART arm_5 397 437 IPR000225 GO:0005515
Tsu04g03351 447 SMART arm_5 236 277 IPR000225 GO:0005515
Tsu04g03351 447 SMART arm_5 190 235 IPR000225 GO:0005515
Tsu04g03351 447 SUPERFAMILY ARM repeat 8 437 IPR016024 -
Tsu04g03351 447 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 393 400 IPR018506 GO:0020037
Tsu04g03351 447 PIRSF V-ATP_synth_H 1 446 IPR004908 GO:0000221|GO:0046961|GO:1902600
Tsu04g03351 447 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 446 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03351 1 446 Primary Pumps ATPases(2) AT3G42050 78.714 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03351 K02144 - gmx:100788723 792.341