Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03345 ATGTTAGGAGCCAATGATGGATTAATCACTGTTGCTTCACTGATGATTGGTGTTGGAGCTATAAAAGAAGATATCAGTGTACTGCTCCGTGCCGGTTTCGCCGGTTTAGTAGTCGGTGCTTGTAGCATGGCAATCGGTGAGTTTGTTTCTGTTTATACTCAATATGATATTGATATAGCAcaaattaaaagagaaagaaaattagcaaataataataatgatgaagaAAGTAGTGAAAGAGAGAAATCGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCGCTAATGCCATTGCTATAA 321 0.3489 MLGANDGLITVASLMIGVGAIKEDISVLLRAGFAGLVVGACSMAIGEFVSVYTQYDIDIAQIKRERKLANNNNDEESSEREKSPNPFQAALASALAFSVGALMPLL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03345 106 Coils Coil 59 79 - -
Tsu04g03345 106 Pfam VIT family 1 76 IPR008217 GO:0005384|GO:0030026
Tsu04g03345 106 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 106 - -
Tsu04g03345 106 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 106 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03345 Tsu-Chr4 42595655 42595975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03345 1 106 Nodulin-like Gene Family AT3G43660 59.434 1.59e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03345 K22736 - gmx:100790996 152.91