Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03258 atggagaagaagatgactCAGTTGGGAAAGAGAACAAGATCTCAAGCTGTTAAAATATTGTCCAATGAACCTCCgtcaaccaaaaaaattaacagcACCACCGTGAAGATATTCTCGCTATATCCACTATTCACTCCGCCGGTCGACGAATGTTACTCCAGTATCACCGAGGAATCCTCCGCATCTAGTTGTTCCAGTAACAAACTATCTGATGCAGagGTTGAGAGTGAGCAAGTTGAAACGTCAACGTGCAACGGTGATCAAATTATAAgGAGAAGAGAGATGGGTTTGTTATGCGAGGTGGTTGGAACGAATTCTTCTACAGAGCAAGAGGAAGAGGTTGATTCAGCTGAGAATAAGGCGCAAAAGATGCCAACGGAATCTGAACTTGATGAATTTTTCTCTGCAGCTGAAAAAGATGTTCAGAAACAGTTTCAAAACAAGTATAATTTCGACATTGTGAAGGACATGCCTTTGGAAGGACGTTATGAGTGGGTTCAATTAAAGCCATAA 513 0.384 MEKKMTQLGKRTRSQAVKILSNEPPSTKKINSTTVKIFSLYPLFTPPVDECYSSITEESSASSCSSNKLSDAEVESEQVETSTCNGDQIIRRREMGLLCEVVGTNSSTEQEEEVDSAENKAQKMPTESELDEFFSAAEKDVQKQFQNKYNFDIVKDMPLEGRYEWVQLKP 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03258 170 MobiDBLite consensus disorder prediction 10 26 - -
Tsu04g03258 170 Pfam Cyclin-dependent kinase inhibitor 124 168 IPR003175 GO:0004861|GO:0005634|GO:0051726
Tsu04g03258 170 MobiDBLite consensus disorder prediction 61 80 - -
Tsu04g03258 170 MobiDBLite consensus disorder prediction 1 26 - -
Tsu04g03258 170 MobiDBLite consensus disorder prediction 103 125 - -
Tsu04g03258 170 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 50 170 - -
Tsu04g03258 170 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 50 170 IPR044275 GO:0004861|GO:0045736|GO:0051726
Tsu04g03258 170 Gene3D p27 108 170 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03258 Tsu-Chr4 41533109 41535258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03258 125 170 Core Cell Cycle Gene Families AT1G49620 69.565 7.92e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03258 - - gmx:548057 137.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00635 05 5270141 5272044 Tsu04g03258 04 41533109 41535258 PCT