Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03239 ATGGATTGGGTACGAGGAGAAACAGTTGGTAGAGGAAGCTTTGCAACAGTTAATTTAGTTATACCCAaaggaaaatcaaaatcaaattcaaattccacTCTTTTTCCTTCTACGGCAGCCGTTAAAACATCCGAGGTTTCAACCTCGCATTCACTCAAAAACGAGAAACAAATTCTTGATTGTTTAGGTTCACACAAACGAATCATTCGTTGTTTCGGAGATGATCATACATTCGAGAATGGTGAAAAGTATTACAATTTATTCCTTGAGTATGCCTCTGCCGGAACTCTCGCCTATCAAGTGAAATTCCACGGTGGCCGGATTCCAGAACAATACATTCGCCGTTACACGAGGTCAATTGTTGAGGGTTTAAGCCATATTCATTGCAATGGATTTGTTCATTGTGACATAAAGCTTCAAAACATTCTAGTTTTCCACGATGGTGAAGTAAAAATCGCCGATTTCGGTCTTGCGAAGAAAACAGGAGAAGAACAGAGTGAAAAACAGAGGTTTGAATGCAGGGGAACTCCGTTGTTTATGTCACCGGAATTAGTGAACGGCGGGGAGCATGAGTCGCCGGCAGATATTTGGGCACTTGGGTGTGCGGTGGTGGAAATGGTAACTGGAAAACCAGCGTGGAATTTGGAGAAAGACGCGAATATGTGGTCGTTGTTGCGTCGAATTGGTGCCAGAGAAGAATCGCCGGTGATACCCGGAGAGTTGTCCAAAGAGGGAAAAGATTTTGTTGAAAAGTGTTTTGTGAATGATCCAAGAAAGAGATGGACGGCTGAGATGCTTTTGAATCATCCCTTTGTTGAAGAAGTGAAGAGTGTTAATGAATCATCACCAAGAACTCACTTTGATTTCAATGATTGGGTTTCTAATGTTAGTGAATCCGTTCCGAATTCCCCGGAATCTGAAGAGTTTTGTCAATGGGATGTTGATTCTAGTTTTTGTTCCGCGGTGGATCGGCTACAGCAGCTTGTGACGGTTGAAAGGCCGGCGAGTTGGTCGGAATCAGATAGTTGGATTAGTGTTAGGTGA 1044 0.4205 MDWVRGETVGRGSFATVNLVIPKGKSKSNSNSTLFPSTAAVKTSEVSTSHSLKNEKQILDCLGSHKRIIRCFGDDHTFENGEKYYNLFLEYASAGTLAYQVKFHGGRIPEQYIRRYTRSIVEGLSHIHCNGFVHCDIKLQNILVFHDGEVKIADFGLAKKTGEEQSEKQRFECRGTPLFMSPELVNGGEHESPADIWALGCAVVEMVTGKPAWNLEKDANMWSLLRRIGAREESPVIPGELSKEGKDFVEKCFVNDPRKRWTAEMLLNHPFVEEVKSVNESSPRTHFDFNDWVSNVSESVPNSPESEEFCQWDVDSSFCSAVDRLQQLVTVERPASWSESDSWISVR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03239 347 SUPERFAMILY Protein kinase-like (PK-like) 3 302 IPR011009 -
Tsu04g03239 347 Gene3D Transferase(Phosphotransferase) domain 1 2 327 - -
Tsu04g03239 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Tsu04g03239 347 Pfam Protein kinase domain 5 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g03239 347 SMART serkin_6 3 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g03239 347 CDD STKc_MAPKKK 2 272 - -
Tsu04g03239 347 ProSitePatterns Protein kinases ATP-binding region signature. 9 42 IPR017441 GO:0005524
Tsu04g03239 347 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 329 - -
Tsu04g03239 347 ProSiteProfiles Protein kinase domain profile. 3 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g03239 347 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03239 Tsu-Chr4 41269319 41270362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03239 1 347 MAP Kinase Kinase Kinase AT5G67080 49.319 6.09e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu04g03239 Pkinase 3.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03239 - - aprc:113858661 488.034