Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03159 ATGAATCTTGAACTCCCAACACCATCAACCAATGAACCTACCCAACAAAAATTCTCTCTTCCAGTTGATTCAGAACACAAATCAACAGTCTTCAAAATACACTCAATAGCCAAACCTCACATGCTAGCATTTCATTTATCATGGTTCTCATTCTTTGCATGTTTTGTTTCAAGTTTTGCAGCAGCACCACTTGTTCCTATAATCCGCGACAACCTTAATCTTACAGCAACGGACATAGGAAATGCCGGTGTTGCATCTGTTTCTGGTGCTGTTTTTGCAAGAATTGCAATGGGAACAGCTTGTGATTTAGTTGGTCCTCGTCTTGCTTCGGCTTCTCTTATTCTCTTGACTTCACCGGCTGTTTATTGCACTTCGATTATCAACTCTGCTACTAGTTTTCTTCTTGTAAGGTTCTTCACTGGCTTTTCTTTAGCCACTTTTGTTTCTACTCAGTTTTGGATGAGTTCTATGTTTTCTACCACTGTTGTTGGCAGAGCAAATGGTTTTTCaggTGGTTGGGGTAACCTTGGTGGAGGAGCTACACAACTGATCATGCCACTTGTATTTTCACTGATTCAAGATAATATTGGTTCAACAAAATTCACTGCATGGAGAATAGCATTTTTCATACCTGCATTTTTGCAATCTATGACAGCattttcaatattaatatttGGTCAAGATTTACCAGATGGAAATTTTCATGGTTTAAAAAAATCAGGTGAAAAAGCCAAAGATGAATTTTCAAAAGTACTTTATCATGGTGTGTTAAATTATAGAGGTTGGATTTTAGCTTTGACTTATGGATATTGTTTTGGTGTGGAGTTGACTGTTGACAATATCATAGCTGAATATTTTTATGACAAGTTTAACCTTAAACTTCATACTGCTGGAATTATTGCTGCAAGTTTTGGTTTGGCTAATTGTTTTTCTAGACCTGGTGGAGGTTTAATTTCTGATTTAATGGCTAAGAGATTTGGAATGAGGGGTAGATTATGGTGTTTGTGGATTTGTCAAACTTTGGCTGGTGTTTTTTGTGTGATTTTGGGACTTGTTGGAAGTTTAAGTGTTTCTATTGTTGTTATGATTATATTCTCTGTTTTTGTTCAAGCTGCTTGTGGAATGACTTTTGGGATTGTTCCTTTTGTCTCAAGAAGGTCATTAGGGGTAATATCAGGAATGGCAGGAGGAGGAGGAAACGTTGGAGCAGTAATAACCCAACTAATATTCTTCAAAGGATCAAGATTTTCAAAAGAAAGAGGAATAACACTAATGGGTGCAATGATAATAATATGCACATTACCattatttttaatctattttccaCAATGGGGTGGCATGTTATTTGGTCCATCATCATCTAAAAATGTTTCAGAAGAAGATTATTACTTGTCTGAATGGAActcaaaagaaagagaaaaagggtCTCATCATGGTAGCTTGAAATTTGCTGATAATAGTAGAAGTGAAAGAGGTAAATTGAATATTTCAACTAGGCCTTCTGAGGATACCACACCACcacaaaatgtttga 1533 0.3503 MNLELPTPSTNEPTQQKFSLPVDSEHKSTVFKIHSIAKPHMLAFHLSWFSFFACFVSSFAAAPLVPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTSPAVYCTSIINSATSFLLVRFFTGFSLATFVSTQFWMSSMFSTTVVGRANGFSGGWGNLGGGATQLIMPLVFSLIQDNIGSTKFTAWRIAFFIPAFLQSMTAFSILIFGQDLPDGNFHGLKKSGEKAKDEFSKVLYHGVLNYRGWILALTYGYCFGVELTVDNIIAEYFYDKFNLKLHTAGIIAASFGLANCFSRPGGGLISDLMAKRFGMRGRLWCLWICQTLAGVFCVILGLVGSLSVSIVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMAGGGGNVGAVITQLIFFKGSRFSKERGITLMGAMIIICTLPLFLIYFPQWGGMLFGPSSSKNVSEEDYYLSEWNSKEREKGSHHGSLKFADNSRSERGKLNISTRPSEDTTPPQNV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03159 510 SUPERFAMILY MFS general substrate transporter 35 440 IPR036259 -
Tsu04g03159 510 MobiDBLite consensus disorder prediction 469 510 - -
Tsu04g03159 510 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 494 IPR044772 GO:0015112
Tsu04g03159 510 MobiDBLite consensus disorder prediction 469 489 - -
Tsu04g03159 510 Gene3D MFS general substrate transporter like domains 243 445 IPR036259 -
Tsu04g03159 510 Gene3D MFS general substrate transporter like domains 35 233 IPR036259 -
Tsu04g03159 510 Pfam Major Facilitator Superfamily 48 405 IPR011701 GO:0022857|GO:0055085
Tsu04g03159 510 CDD MFS_NRT2_like 44 438 IPR044772 GO:0015112
Tsu04g03159 510 MobiDBLite consensus disorder prediction 490 510 - -
Tsu04g03159 510 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 444 IPR020846 GO:0022857
Tsu04g03159 510 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 10 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03159 Tsu-Chr4 39433186 39436965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03159 16 509 Inorganic Solute Cotransporters AT1G12940 70.040 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03159 K02575 - gmx:100787888 806.979