Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03122 ATGCTTTCTAATCACTTATTTCTATTCAGGGTAGGCTATAAATGGATCACACAATTTATTGCTCTTGGTTGTTATGCTTTATTGCTTTTACCAGGCTTTGTTCAAGTTggatatcattattttttctctaGTCAGATACGCAGAAGTGTAGTTTATGGAGATAAACCACGAAATagGCTTGACTTGTTTTTGCCAAGAAATAGTGACGGCCCAAAACCAGTTGTTGCTTTCATTACTGGCGGAGCCTGGATTATAGGTTACAAAGCATGGGGCTCTCTTTTAGGTCAACAGCTCTCGGAAAGAGATATCATTGTGGCATGCATAGATTACAGAAATTTCCCTCAGGCAACCATCAGTGATATGATAGAAGATGCTTCCCAAGGCATCTCATTTGTGTGCAACAACATTGCAGAATATGGAGGTGACCCTAACAGAATTTATCTAATGGGACAGTCAGCTGGGGCACATATTGCAGCATGTACGATTGTGGAGCAGGCAATCAAAGAGGCTGGTGAAGGAGAGAGTACTTCTTGGAGTCTTTCCCAGATTAAGGCTTATTTTGGTTTATCTGGAGGGTATAATTTGTTCAACCTAGTAGATTACTTCCACAGTAGAGGCCTTTACCGTTCCATCTTTTTAAGCATAATGGAAGGGGAGGAATCACTACGGCGGTTTTCCCCTGAAGTAATGGTTCAAGATCCAAACATTGGAAATGCTGTTTCTCTACTACCTAATATGGTTCTTTTTCATGGCACTGGAGATTATTCCATACCGTCAGATCAAAGTACATCATTTGCCAAAACTCTTAAAAGACTTGGAGTCAAAGCTGAAGCAATTTTATATGAAGGGAAGACTCATACAGATGTGTTTCTACAGGATCCTATGAGGGGTGGAAACGATGACATGTTTGATGATTTAGTAGCATATATTCATGCCGGCGATGCCGAGGCCCTTTCTAGAGATGCAACAGCTCCTCCACGGAGACGCCTTGTACCCGAATTCATGTTAAAATTGGCTCATGCTGTCAGTCCTTTCTAG 1038 0.4066 MLSNHLFLFRVGYKWITQFIALGCYALLLLPGFVQVGYHYFFSSQIRRSVVYGDKPRNRLDLFLPRNSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQATISDMIEDASQGISFVCNNIAEYGGDPNRIYLMGQSAGAHIAACTIVEQAIKEAGEGESTSWSLSQIKAYFGLSGGYNLFNLVDYFHSRGLYRSIFLSIMEGEESLRRFSPEVMVQDPNIGNAVSLLPNMVLFHGTGDYSIPSDQSTSFAKTLKRLGVKAEAILYEGKTHTDVFLQDPMRGGNDDMFDDLVAYIHAGDAEALSRDATAPPRRRLVPEFMLKLAHAVSPF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03122 345 PANTHER ARYLACETAMIDE DEACETYLASE 7 335 - -
Tsu04g03122 345 Pfam BD-FAE 60 269 - -
Tsu04g03122 345 Gene3D alpha/beta hydrolase 42 295 IPR029058 -
Tsu04g03122 345 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 7 335 - -
Tsu04g03122 345 SUPERFAMILY alpha/beta-Hydrolases 41 316 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03122 Tsu-Chr4 38832566 38839408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03122 11 345 Carbohydrate Esterase AT1G26120 77.612 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03122 K15889 - gmx:100790850 617.846