Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03100 ATGGTGGAAGTTTGTTCAAATTCGGtcaatgatgaagatgaatcaTCTCAGGGAACAAAACATTTAGCATTGCCTGATAATGAAGGGCATGAAGAACTTGGTGATGAAAGTGTAGATGATGCAGAATGCAATAGGACAGAAGGTTTAGGGGGTTgtatttttagtgaaattaaTGTTGTGAATTGTTTGGAAGACATCTCGAAGATTGACTTTAAACAAGTAAGTGAAGAAGATGTAATGAGATATCATTTTATGGATCGTGGGGTGGCTTTTACATTCTACAATTGGTATGCTAGTTTCCATGGTTTTGCTGGAAGAAAAAGTAAAGTTATGAGGAACAAAAAATGTGAAATAACTCAACAGACATTTGTCTGCTACATACAGGGGGTTAGAGATGAGAAAGGCTTTTCAAGTAGCCGAAAGAGAGTAGCTAAAGCATGCATTAGATACGGTTGTGAAGCAAAATGTCATGTTCATATCGAAGCAAATAGTGGAAGTTGGTACATGAAATTGCTCCACAACGCACACAACCATACTTTGTTGGATGGTAAATTTACTGGAATGCTACCGACACATAGAAAGATGACGAATCATCACATATGGCGAATGAGCAATTCATGTTAG 624 0.3574 MVEVCSNSVNDEDESSQGTKHLALPDNEGHEELGDESVDDAECNRTEGLGGCIFSEINVVNCLEDISKIDFKQVSEEDVMRYHFMDRGVAFTFYNWYASFHGFAGRKSKVMRNKKCEITQQTFVCYIQGVRDEKGFSSSRKRVAKACIRYGCEAKCHVHIEANSGSWYMKLLHNAHNHTLLDGKFTGMLPTHRKMTNHHIWRMSNSC 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03100 207 Pfam FAR1 DNA-binding domain 92 181 IPR004330 -
Tsu04g03100 207 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 196 - -
Tsu04g03100 207 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 29 196 - -
Tsu04g03100 207 MobiDBLite consensus disorder prediction 14 31 - -
Tsu04g03100 207 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03100 Tsu-Chr4 38519565 38520331 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu04g03100 FAR1 1.4e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03100 - K17604 mtr:MTR_8g066350 150.984