Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03076 ATGCACCTCTACAGAAAGAGTTATCAGCAGCTAAACTTGCCACAATCAAATCATTTGCTTCAGAATGTTGCAAGTTCATCTTCTAACAATGTCTCAAATTATCGACAATATTCAAATTCTGATGCCATTATTTATGTTGGTTGTGGAGAACGTGGAAATGAAATGGCAGAGGTTCTGATGGACTTTCCACAACTCACAATGACATTACGTAATGGCCGTGAAGAATCTGTCATGAGCGTACAACACTTGTGGCTAACACTTCAAACATGCCAGTGGCTGCTCGTGAAGCTTCAATTTATACAGGCGGAAATGCCTGCTGATAGCGGATATCTTGCTTATCTTGCTGCACGTTTAGCCTCTTTCAATGAATGTGCACCCTTTCATTTTACACTTGGAGGTCCTGAACGGACAGGTAGCGTAACAATTGTTGGTGATGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCCGTGACATCTGCAACCCTCAGCATAGTTCAGATGTGTTATGGATGCCTCGACGACCCTAATGATTGCTTGAATTTACTTGCGATATTTGATGCCTCGATGCCTAATAAATGCCTTCAATTTGCTTGTGATATTCTTGCCACAATGACCCTAAATGAACTACGGAGTTACACACTTCTTATCTATTTACAAGTTACTGATGTTACATTGTTTTTAGCTTTTCAAATGTGGGAATGTCAAATTATAAGAGCAGAACGGCCAGAGGCACGTGAGGGTCATAGTGCATCAATTGTTGGCCAACAACTCTTCATCTTTGGTGGTTGTGGAAAATCTGCTGATAATTACAATGAGGTTTGGTACAATGAGCTTTACATACTGAATACAAATAATTTTCCCTCATGA 867 0.4048 MHLYRKSYQQLNLPQSNHLLQNVASSSSNNVSNYRQYSNSDAIIYVGCGERGNEMAEVLMDFPQLTMTLRNGREESVMSVQHLWLTLQTCQWLLVKLQFIQAEMPADSGYLAYLAARLASFNECAPFHFTLGGPERTGSVTIVGDVSPPGGDFSDPVTSATLSIVQMCYGCLDDPNDCLNLLAIFDASMPNKCLQFACDILATMTLNELRSYTLLIYLQVTDVTLFLAFQMWECQIIRAERPEAREGHSASIVGQQLFIFGGCGKSADNYNEVWYNELYILNTNNFPS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03076 288 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 35 67 IPR000194 GO:0005524
Tsu04g03076 288 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 35 81 IPR022878 GO:0046034|GO:0046961
Tsu04g03076 288 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 101 171 IPR022878 GO:0046034|GO:0046961
Tsu04g03076 288 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 101 168 IPR000194 GO:0005524
Tsu04g03076 288 Gene3D - 85 174 IPR027417 -
Tsu04g03076 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 168 IPR027417 -
Tsu04g03076 288 SUPERFAMILY Kelch motif 235 283 IPR015915 GO:0005515
Tsu04g03076 288 Gene3D - 9 83 IPR027417 -
Tsu04g03076 288 PANTHER VACUOLAR PROTON PUMP3 35 81 - -
Tsu04g03076 288 PANTHER VACUOLAR PROTON PUMP3 101 171 - -
Tsu04g03076 288 Gene3D - 203 286 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03076 Tsu-Chr4 38062437 38069122 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03076 36 170 Primary Pumps ATPases(2) AT1G78900 57.310 7.81e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03076 K02145 - gmx:100775727 163.31