Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03054 ATGGAGACAAACGCCGAATCACCCTTCCACTCCTCTCTCAATCCAGGCGTCGCTTTACTCTCACGCAAATTATTCCCCACATGCCGCAGATTCATTGAACGTCAACCAAGATCCGATCCCAACATTGTTACTCAACTCGACCATATGCAAGCCATTGTTGATGTTCTAGAATCTTCATCTCTCCGATTGGGTCCCACTAAAACTCATCCTGACCACTATTCTATCCTTCAACTCAAACCATCCGACGCTACAAACCGTGACCTTGTTCGACAGCAGTTCAAGAAGCTTGTTCGTTTACTTGATCCAAACAAGAATAAGTTCCCTTTTGCTGATGAAGCTCTAATGAGAGTCCGTGAAGCCTGGTATGTTCTCTCTGATCCGATTAGATTAGATCGATTTGAACGCGAAATTGGTGGGGAAGGAAATGGTTTTTCATCTGCTTCGTTTTGGACTATGTGTCCTTATTGTTGGTATTTACATGAGTATGAGAGAAAATATGAAGATTTTACACTTCGGTGTGGAAATTGTAAGAGGACTTTTCATGGTACTGCTGTGAATCCGCCTGATCCGGAATCAATGGTGGAAGGGAAGGAACAATATTATTGCTATCACATGAGTTTGCCTTTAAGGTATCCTGCTGAAAAAATGTCGGAGTTTGAACTTGGTGGAAATGGAGGTAAGAGAATGAGGATTAAAACTGTGGCTAAGAGAGTTAAAGTGAAAGGGTTTGTTTTGGATAGTGAATCGGATCCGGAAATGGATGTGGAAATATGA 774 0.4212 METNAESPFHSSLNPGVALLSRKLFPTCRRFIERQPRSDPNIVTQLDHMQAIVDVLESSSLRLGPTKTHPDHYSILQLKPSDATNRDLVRQQFKKLVRLLDPNKNKFPFADEALMRVREAWYVLSDPIRLDRFEREIGGEGNGFSSASFWTMCPYCWYLHEYERKYEDFTLRCGNCKRTFHGTAVNPPDPESMVEGKEQYYCYHMSLPLRYPAEKMSEFELGGNGGKRMRIKTVAKRVKVKGFVLDSESDPEMDVEI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03054 257 SUPERFAMILY Chaperone J-domain 66 134 IPR036869 -
Tsu04g03054 257 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 6 255 - -
Tsu04g03054 257 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 255 - -
Tsu04g03054 257 Pfam DnaJ domain 71 128 IPR001623 -
Tsu04g03054 257 Gene3D DnaJ domain 65 143 IPR036869 -
Tsu04g03054 257 CDD PHD_SF 152 202 - -
Tsu04g03054 257 SUPERFAMILY FYVE/PHD zinc finger 148 203 IPR011011 -
Tsu04g03054 257 ProSiteProfiles dnaJ domain profile. 71 139 IPR001623 -
Tsu04g03054 257 CDD DnaJ 71 126 IPR001623 -
Tsu04g03054 257 SMART dnaj_3 70 129 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03054 Tsu-Chr4 37780779 37781842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03054 42 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.990 8.21e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03054 - - gmx:102659715 285.034