Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03052 ATGGCGGAGCAACGAAACCGTTGGAGCTGGGACGTTACCGGTTTTGAACCATGGAAGTCATCCTCGCCGCAGACTCCGTCGTCACCGTCAGAACACGACGATCGGAAACCTAATGCGCCGTTAGTAAGGAGGTACTCTATTTCGACTTCATCGGTTCTTCCGCAGCATAAAATTACTACAGCTTCTAAGCTTCAACGGTTAAAGGATAAAGTTAAGCTTGCTAGAGACGACTATTTGCAGTTAAGACAAGAAGCAAGTGAGCTTCAAGAATATTCAAATGCAAAACTTGATAGAGTTACACGATATCTTGGTGTTCTTGCTGAGAAAACCCGCAAGTTAGATCAAGTTGCCCTTGAAACTGAAGCAAGAATATCACCACTGATCAATGAGAAAAAGAGATTGTTCAATGATTTATTGACATCTAAAGGAAGCATACGCATATTCTGTCGGACAAGGCCGTTATTTGAAGATGAAGGTCCTTCAGTTGTTGATTTTCCAGATGATCACACCATTCGTGTAAATACTGGTGATGATACCTTCGCTAACCCCAAAAAAGATTATGAGTTTGATAAAGTTTATGGTCCTCATGTTGGACAAGCTGAGTTATTCAGTGATGTCCAACCACTGGTTCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCCTATGGTCAAACCCATTCCGGAAAAACACACACTATGGAAGGATCGAACTATGATCGGGGTTTATATGCTCGGTGTTTTGAGGAGTTGTTTGATTTATCCAACTTGGATACAACCTCCACTTctcaatataaattttgtgttacAGTTTGTGAACTTTATAATGAACAGACTAGGGATCTCCTTCTGGAGTCAGGGAAAAACATGCCAAAACTCTGCTTTGGATCGGCTGAATGTTCCGTAGAACTCGTGCAGGAAAAAGTCAATAACCCCTTGGAATTCTCTACAGTTTTAAAATCCGCTTTTCAGAATCGGGGAAATGATTTATTAAAGATCACCGTATCTCATTTGATTGTCACAATACACATATTTTATAACAATTCGATCACTGGTGAGAACTCATATAGCAAACTTTATCTGGTTGACTTGGCTGGAAGTGAAGGTTCAATAACAGAAGATGATAGTGGAGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCGCTTTCGGCGTTGGGagatgttttgttttctttaacaTCGAAGAAGGATATTGTTCCTTATGAAAATTCAATGCTAACAAAACTTCTAGCAGATTCACTTGGTGGGACTTCAAAAACTCTGACGATTGTGAATGTCTGTCCAAGTGTTTCAAATTTATCAGAAACATTGATGTCTCTCAACTTCTCTGCTAGAGCTCGAAATTCTGTCTTAAGTCTTGGAAACCGAGATACAATAAAGAAATGGAAAGATGTTGCCAACGATGCCCGTAAGGAGTTGTAtgagaaggaaaaagaaattcaCGATCTAAAGCAAGAGGGTCTGGGACTCAAGCAAGCACTTAAAGATGCTAATGATCAGTGCGTTTTACTCTTCAATGAAGTACAAAAGGCATGGAAAGTTTCCTCTGCATTGCAGACCGATTTAAAGTCAGAGCATATTTTGCTTTCAGATAAGTATAAGATTGAGAAAGAAGAAAGTACCCAGCTTAGAAATCAAGTTGCTCAGCTATTACAGTTAGAACAAGATCAAAAATTGCAGATACAACAGCAAGATTCAACCATCCAAAGTTTGCAGGTTAAAATCAGAACCCTTGAAACTGAGCTCAGTGAAGCACTTGGATCCAGCAAAAGTAGTTCAACGGTTGTTTCAGAGCCAGAGTCTGCAGCTCTATCTGATTCCAGAACAACTGGAGATGGCACTGTGGTAGCCAAAAAATTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCatgaagaaaatgagaaattgtTTGATAGATTGACTGAGAAGAAAGCATCTGTGGCTGGGTCACCTATGCCGTCAAGTCCATTATCTCGTGAATCAGTAAATATTCAGCCTCAGAATACGACAAGGAATGGCCCTAGCAACAACAAAGTAGCAAATTCTACTCATGCTCCTTCTTCACCTTTGACCGCTGCTGCTAAGAATGATGGAACAGTTGCTTTGGTTAAATCTAGCTCCGAAATTGTCAAGACTACCCCTGCGGGTGAATATCTTACTACTGCTCTGAATGACTTTGACCCAGATCAATATGAAGGtcatgctgccatttctgacgGTGCAAACAAGCTTTTGATGTTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCCTCTAGAGAACATGAGATACTTGCTGAAATCAGGGATGCTGTTTTCTCTTTTATTAGGAAAATGGAACCAAAGCGAGTAATGGACACCATGCTTGTTTCACGTGTTAGAATTCTGTATATAAGATCTTTACTTGCAAGGTCCCCAGAATTGCAATCAATTAAGGTCTTGCCCGTCGAGTGCTTTCTTGAGAAGGCTAATACAGGCCGCAGTAGAAGTTCCAGCCGAGGGAATAGTCCCGGAAGGTCTCCTGTACAATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAATTTAAAGCCAGAAAAGAAGTCCAAATTTTCATCTGTTGTGTTGAAGATTCGTGGGATTGATCAGGAAATCTGGAGACAGCAGGTGACTGGTGGGAAGCTTAGAGAAATTACCGAGGAAGCCAAAAGTTTTGCAATAGGTAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCGGCAGGCGAGTTGCAGCGCCAAATTAGATCCTGGCTTGCAGAGAGCTTTGACTTTCTATCTGTTTCTGGAAATGATGCATCTGGGGGGTCAACTGGTCAGTTGGAACTTCTTTCAACAGCAATTATGGATGGCTGGATGGCTGGACTTGGTGCTGCTCTGCCTCCCCACACTGATGCCCTTGGCCAGCtattatttgaatattcaaAACGTGTATATACTTCTCAGCTACAGCATTTAAAGGTGCGCCTCATGTTAGATCTGCATAGTATGACTATAAAGGCACATCtcgatttttttattactaaacaAAAAAGTATGTTTCGGACACGTATCCGACACCGATGTATGCAGAAAGCATctgataataatttttgttaa 3156 0.3973 MAEQRNRWSWDVTGFEPWKSSSPQTPSSPSEHDDRKPNAPLVRRYSISTSSVLPQHKITTASKLQRLKDKVKLARDDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTRKLDQVALETEARISPLINEKKRLFNDLLTSKGSIRIFCRTRPLFEDEGPSVVDFPDDHTIRVNTGDDTFANPKKDYEFDKVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSNYDRGLYARCFEELFDLSNLDTTSTSQYKFCVTVCELYNEQTRDLLLESGKNMPKLCFGSAECSVELVQEKVNNPLEFSTVLKSAFQNRGNDLLKITVSHLIVTIHIFYNNSITGENSYSKLYLVDLAGSEGSITEDDSGERVTDLLHVMKSLSALGDVLFSLTSKKDIVPYENSMLTKLLADSLGGTSKTLTIVNVCPSVSNLSETLMSLNFSARARNSVLSLGNRDTIKKWKDVANDARKELYEKEKEIHDLKQEGLGLKQALKDANDQCVLLFNEVQKAWKVSSALQTDLKSEHILLSDKYKIEKEESTQLRNQVAQLLQLEQDQKLQIQQQDSTIQSLQVKIRTLETELSEALGSSKSSSTVVSEPESAALSDSRTTGDGTVVAKKLEEELKKRDALIERLHEENEKLFDRLTEKKASVAGSPMPSSPLSRESVNIQPQNTTRNGPSNNKVANSTHAPSSPLTAAAKNDGTVALVKSSSEIVKTTPAGEYLTTALNDFDPDQYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKANTGRSRSSSRGNSPGRSPVQYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDQEIWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAESFDFLSVSGNDASGGSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRVYTSQLQHLKVRLMLDLHSMTIKAHLDFFITKQKSMFRTRIRHRCMQKASDNNFC 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03052 1051 ProSiteProfiles Kinesin motor domain profile. 144 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03052 1051 MobiDBLite consensus disorder prediction 595 621 - -
Tsu04g03052 1051 MobiDBLite consensus disorder prediction 665 707 - -
Tsu04g03052 1051 Coils Coil 64 91 - -
Tsu04g03052 1051 Coils Coil 626 660 - -
Tsu04g03052 1051 MobiDBLite consensus disorder prediction 1 38 - -
Tsu04g03052 1051 Gene3D Kinesin motor domain 88 458 IPR036961 -
Tsu04g03052 1051 Pfam Kinesin motor domain 155 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03052 1051 PRINTS Kinesin heavy chain signature 359 377 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03052 1051 PRINTS Kinesin heavy chain signature 216 237 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03052 1051 PRINTS Kinesin heavy chain signature 408 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03052 1051 ProSitePatterns Kinesin motor domain signature. 358 369 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu04g03052 1051 Coils Coil 542 562 - -
Tsu04g03052 1051 Coils Coil 468 509 - -
Tsu04g03052 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 495 IPR027417 -
Tsu04g03052 1051 PANTHER KINESIN-LIKE PROTEIN KIN-14A-RELATED 2 1000 IPR030109 GO:0008017|GO:0009904
Tsu04g03052 1051 MobiDBLite consensus disorder prediction 657 707 - -
Tsu04g03052 1051 SMART kinesin_4 142 466 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03052 1051 Coils Coil 570 597 - -
Tsu04g03052 1051 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1000 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03052 Tsu-Chr4 37756349 37769971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03052 131 459 Calmodulin-binding Proteins AT5G65930 36.657 1.68e-48 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03052 - - mtr:MTR_8g471180 1746.1