Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03005 ATGGAAATTGATGGATCTAAAGAAATCATTCTTGGTCAAGTTGTGAATAATAAGGATGAGGCATACAACTTGTATCAAGAACATGCTTTCAAAATGGGTTTTAGTGTACGTAAGGGGAGGGAGTTATATTATGATAATGAGAAGAAACAAACACGCTTAAAAGAATTTTATTGTTCTAAACAAGGGTTTAAGAACAACAAACTCGAAGGTGAAGTGGCTTATGAGAGAGCAGATTCAAGAACAAATTGTAATGCTATGGTGCGATTTAATGTGAGCAAGGAAGGTCTATATAAAATAACTCAGTTGGTATTGGATCACAATCATGAGTTTGTACCTCCTGAGCAAAGACATATGCTACATTCTATGAGAAACTTGTCAAATGTCAAAGGTGGTCTCATAAAGTCCATGGTGAATGCCGGTATGAAAGTTACAAATATTTGGAGTTATCTTGGTGAAGAAGTTGGAGGATTTAATAATCTTGGTATAACTTTGAAAGATATGCACAATTATGTCTACACAGAAAAGTTGAAGTCAATTGAAGCCGGTGATGCTCAAGCTTTAGTTAACCATTTACAAAATAGGCAAGCATAA 591 0.3469 MEIDGSKEIILGQVVNNKDEAYNLYQEHAFKMGFSVRKGRELYYDNEKKQTRLKEFYCSKQGFKNNKLEGEVAYERADSRTNCNAMVRFNVSKEGLYKITQLVLDHNHEFVPPEQRHMLHSMRNLSNVKGGLIKSMVNAGMKVTNIWSYLGEEVGGFNNLGITLKDMHNYVYTEKLKSIEAGDAQALVNHLQNRQA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03005 196 Pfam FAR1 DNA-binding domain 24 112 IPR004330 -
Tsu04g03005 196 PANTHER OS12G0160900 PROTEIN 8 194 - -
Tsu04g03005 196 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 194 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03005 Tsu-Chr4 37104912 37105502 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu04g03005 FAR1 7.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03005 - - mtr:MTR_6g051425 313.923