Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02999 ATGGCCATCAATGACTCATTAAGGACTCAAATACTTTTCATCACCATCACTTCCTTCCTTATCTTAGCTAAATATGTAAACTCAACTGCATTCTCATTTGATAATTTTGAGCCATACCAAAACAATGTTCAACTCGAAGGCAATGCCTTCATTTCAAACGGGTCCGTCTTTCTCACAAACGTCATCCCAAAGAGTGCTGGTAGAGCCTCTTATGCTGCACCAGTGCATCTTTGGGATGCAAAAACAGGCAACCTCGCAGCCTTCACTTCCATTTTCTCTTTTGTAGTTGCACCAAATGGCCCCGGACGCTTTGGAGATGGAATCGCCTTTTTCATTGCACCGTTCAATTCCAACATCCCAAAAAATTCAAGTGGTGGATTTCTTGGACTATTTAACGCCGAAACCGCTTTGAACTCTTACCAAAATCAAATTGTTGCTATTGAATTCGATTCATTCGGAGGGAATCCTTGGGATCCTGTTTATCCCCATGTTGGCATTGATGTGAACTCCATTGCTTCTGTAACAACAGAGCCGTGGAATACCGGAAGTGTTGCCAATGGTTTCACTACTGCATTTGCTTTTGTGAGTTATGAACCTGTGACGAAAAATTTAAGCGTTTTGGTACAATATCCTGAAAAATATGCTGTGAATGGAACTTCAAGTAGTATCTCCTTTGTGATTGATTTGAGGACTGTGTTACCTGAATGGGTTAGAATTGGGTTTTCTGGAGCCACTGGACAATTGGTTGAATTGCACAAGATTCTTTCATGGACCTTTAAGTCAAGTTTCTAA 792 0.4091 MAINDSLRTQILFITITSFLILAKYVNSTAFSFDNFEPYQNNVQLEGNAFISNGSVFLTNVIPKSAGRASYAAPVHLWDAKTGNLAAFTSIFSFVVAPNGPGRFGDGIAFFIAPFNSNIPKNSSGGFLGLFNAETALNSYQNQIVAIEFDSFGGNPWDPVYPHVGIDVNSIASVTTEPWNTGSVANGFTTAFAFVSYEPVTKNLSVLVQYPEKYAVNGTSSSISFVIDLRTVLPEWVRIGFSGATGQLVELHKILSWTFKSSF 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02999 263 ProSiteProfiles DOMON domain profile. 208 263 IPR005018 -
Tsu04g02999 263 Pfam Legume lectin domain 29 262 IPR001220 GO:0030246
Tsu04g02999 263 PIRSF Plant_L_lectin 3 263 IPR016363 GO:0030246
Tsu04g02999 263 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 20 262 - -
Tsu04g02999 263 Gene3D - 26 263 - -
Tsu04g02999 263 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 20 262 - -
Tsu04g02999 263 CDD lectin_legume_LecRK_Arcelin_ConA 31 263 IPR001220 GO:0030246
Tsu04g02999 263 ProSitePatterns Legume lectins alpha-chain signature. 233 242 IPR000985 -
Tsu04g02999 263 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 262 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02999 Tsu-Chr4 37022148 37022939 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02999 14 263 Receptor kinase-like Gene Family AT5G10530 38.039 4.91e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02999 - - aprc:113871630 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02999 04 37022148 37022939 Tsu05g01314 05 11937465 11938316 PCT