Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02989 ATGACTCCAAATTTCTATGTCCTTCcactcttcttcctctcttttattttcttcactTTTCCTACTATTTCAATTCACTTCCAAATTCCAAGTTTTAATCATGCTGATGCTAGCATTTTCTACCAAGGATCTGCAGCACTTCATGATGGACAAGTAAATTTCAACATTAATGGCATGTATACAAGTCAAGTAGGAAGAATCTTGTATGCCAAAAAGGTATTACTGTGGGACTCAAGTACAGGTAAACTCACTGACTTCACAACTCGTTACAATTTCATTATTGAGACTCAAAACAAAGTTGTGTTTGGCCATGGACTTGCCTTTTTCCTTGCTCCTGTTGGAATTGAAATTCCACCTAATTCTTCTGGTGGCTTTCTTGGCCTATTCAACACCACAACTATGTATTCATCATCTaataacaaaattgtttttgttgagTTTGATTCGTTCCCAAATACTGAATGGGGAGAGACAACAGAGCATGTGGGAATCAACGATAACTCGGTTATTTCATCAGTGATGATACCTTGGAATGCCAGTCTACATAGTGGAGACACTGCTGAGgaaaagattaGTTTTGATACTAACCGGGATTTTACTTGTGGGACTGGGAGTAGGAGTGGAGTGGGATCACTTGCAACATATGCATTACTTTGGAGAAAGACGAGACGAggtaaaaatgaaaaggaaGAGGCTATGAGTTTAATCACAATGAATGATGAACTTGAAAGAGGAGCAGGGCCAAGGAGGTTCACATACGAATACGAAGAACTTAATTTGGCCACGAATAACTTCTCTAGTGATGGAAATTTGGGTCAAGGTGGTTTCGGCGCTGTATATAAAGGTTATTTTTTCTATCTAGATTTACCAATTGCTGTGAAGAAAATATCCAAAGGATCTAGACAAGGTAAGAAAGAATATCTAACTGAAGTTAAAGTCATTAACCAATTGAGACACCGAAATCTTTTGAAGTTGTTAGGTTGGTGCCATGAAAAAGGTGAGTTTCTACTTGTTTATGAGTTTATGCCAAATGGTAGTCTTGATTCTCATTTATTTGGTAAGAGAGCACCTCTTTCTTGGAGTGTAAGGCACAAAATAGTTCTTGGATTGGCACATGGTATGCTTTATTTACATGAAGAATGGGAGAGATGTGTGGTACATAGGGATATCAAATCAAGTAATATTATCTTAGATTCGAAATTCAATGCCAAGATTGGTGATTTCGGGTTGGCTAGATTAATAGATCATGAAATTGGACCTCAAACTACTAGGCTAGCTGGATCAATTGGCTATATAGCTCCAGAATATGTGAGTACAGGGAGGTCCAGTAGTTTTGGGATAGTTGTCTTGGAGATTACTACAGgaaagaaaactactgaagTTATGAAGGAAAAAGGTAAAGAGAAGCGAAAGATTGattgggtttgggatcactatGGAAGAGGAGAGATACTTATGGCCATGGATGAGAATTTGAAAAGGGATTTTGATGAGAAACAAGTAGAGTGTTTGATGATTGTTGGATTATGCTGTGCTCATCCTGATGTAAATCTTAGACCATCTATTAGACAAGCACTTCAAGTGCTTAATTTTGAGGTTGCCATGCCAAATCTTCCGTTAAAAAGGCCTATTTTAAGCTATCATGCTCCTATACTATTTTTAGGCTCCGTAGAAACTACCATAACCAAATATGGTCGTTAA 1701 0.3539 MTPNFYVLPLFFLSFIFFTFPTISIHFQIPSFNHADASIFYQGSAALHDGQVNFNINGMYTSQVGRILYAKKVLLWDSSTGKLTDFTTRYNFIIETQNKVVFGHGLAFFLAPVGIEIPPNSSGGFLGLFNTTTMYSSSNNKIVFVEFDSFPNTEWGETTEHVGINDNSVISSVMIPWNASLHSGDTAEEKISFDTNRDFTCGTGSRSGVGSLATYALLWRKTRRGKNEKEEAMSLITMNDELERGAGPRRFTYEYEELNLATNNFSSDGNLGQGGFGAVYKGYFFYLDLPIAVKKISKGSRQGKKEYLTEVKVINQLRHRNLLKLLGWCHEKGEFLLVYEFMPNGSLDSHLFGKRAPLSWSVRHKIVLGLAHGMLYLHEEWERCVVHRDIKSSNIILDSKFNAKIGDFGLARLIDHEIGPQTTRLAGSIGYIAPEYVSTGRSSSFGIVVLEITTGKKTTEVMKEKGKEKRKIDWVWDHYGRGEILMAMDENLKRDFDEKQVECLMIVGLCCAHPDVNLRPSIRQALQVLNFEVAMPNLPLKRPILSYHAPILFLGSVETTITKYGR 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02989 566 Gene3D Phosphorylase Kinase; domain 1 249 341 - -
Tsu04g02989 566 Gene3D Transferase(Phosphotransferase) domain 1 342 550 - -
Tsu04g02989 566 Pfam Protein kinase domain 267 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02989 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Tsu04g02989 566 SUPERFAMILY Protein kinase-like (PK-like) 251 545 IPR011009 -
Tsu04g02989 566 CDD STKc_IRAK 271 530 - -
Tsu04g02989 566 ProSiteProfiles Protein kinase domain profile. 265 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02989 566 CDD lectin_legume_LecRK_Arcelin_ConA 25 194 IPR001220 GO:0030246
Tsu04g02989 566 PANTHER - 208 563 - -
Tsu04g02989 566 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 198 IPR013320 -
Tsu04g02989 566 PANTHER PUTATIVE-RELATED 208 563 - -
Tsu04g02989 566 Pfam Legume lectin domain 25 196 IPR001220 GO:0030246
Tsu04g02989 566 ProSitePatterns Protein kinases ATP-binding region signature. 271 295 IPR017441 GO:0005524
Tsu04g02989 566 PANTHER PUTATIVE-RELATED 22 196 - -
Tsu04g02989 566 PANTHER - 22 196 - -
Tsu04g02989 566 SMART serkin_6 265 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02989 566 Gene3D - 23 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02989 Tsu-Chr4 36855212 36857151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02989 10 548 Receptor kinase-like Gene Family AT5G10530 43.471 3.64e-170 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu04g02989 Pkinase 8.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02989 - - mtr:MTR_8g067690 805.823