Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g02957 | ATGGCTTCCGATGGTTTCACTGATAAGAATCTCGTGTTCAGAAAACTCAAGATGAAGTCAGAGAATAAGATGTGTTTTGATTGTAATACGAAGAATCCAACATGGGCTTCTGTTACGTATGGGATTTTTCTGTGCATTGATTGCTCTGCTGTTCATCGAAGTCTCGGTGTTCATGTTAGCTTCGTGAGATCTACAAACTTAGACTCATGGAGTCCCGAGCAACTAAAAATAATGAGTTTTGGAGGAAACAGCCGTGCACAGATTTTCTTTAAGCAACATGGTTGGACCGACGGTGGTAAAATAGAAGCAAAGTATACATCCAGAGCTGCAGAGTTGTACAGGCAAATTCTTTCAAAGGAAGTAGCTAAAAGTATGGCTGAGGAGGGAGGCTTGCCTTCATCACCTGTTGCTTCTCAGTCTTCTAATGGACTTTCTAATGTCATGACTAATGAGGTactgaaagaaaataatttggAGAAGGCAGAAAAGCCTGAGAGCACATGTTCTTCACCTAGAGCTTCACATACAGTAGTATCAAATAATTTGAGGAAGCCTATTGGTGGTAAAAAGCCTGGGAAGAGTGGGGGACTTGGTGCTCGTAAGCTCAATAAAAAGCCAAATGAGTCTCTCTATGATCAGAAACCTGAAGAACCACCTGCTCCAGTTCCATCCACGACAAACAACAACTTGTCTACCAGGCCATCTTTGACTTCTCGGTTTGAGTATGTAGATAATGTTCAATCATCTGAGTTGGATTCTGGAGGTTCAAATGTATACAATCACGCTTCTGCACCAAAGTCATCAAATTTCTTTGCAGACTTTGGAATGGACGGTGGTTTCCCTAAGAAATTTGGATCAAACACCTCAAAAGTGCAAATTGAGGAATCTGATGAAGCAAGAAAGAAGTTCTCAAATGCTAAATCCATTTCGTCATCTCAATTTTTTGGAGACCAGAACAAGGCGAGAGATGCTGATACTCGAGCAACTTTGTCAAAGTTTTCAAGTTCATCTGCCATCTCCAGTGCTGATCTTTTTGGCGACTCCGGAGATTCCACCATTGATCTTGCTGCTAGCGATCTCATCAATCGATTACATTTTCAGGCACAACAGGATATCTCTTCCCTCAAGAACATTGCTGGAGAGACTGGGAAAAAACTCAGCTCCTTGGCCTCCTCCTTGATGACCGATCTTCAGGACCGAATTCTCTAA | 1209 | 0.4152 | MASDGFTDKNLVFRKLKMKSENKMCFDCNTKNPTWASVTYGIFLCIDCSAVHRSLGVHVSFVRSTNLDSWSPEQLKIMSFGGNSRAQIFFKQHGWTDGGKIEAKYTSRAAELYRQILSKEVAKSMAEEGGLPSSPVASQSSNGLSNVMTNEVLKENNLEKAEKPESTCSSPRASHTVVSNNLRKPIGGKKPGKSGGLGARKLNKKPNESLYDQKPEEPPAPVPSTTNNNLSTRPSLTSRFEYVDNVQSSELDSGGSNVYNHASAPKSSNFFADFGMDGGFPKKFGSNTSKVQIEESDEARKKFSNAKSISSSQFFGDQNKARDADTRATLSKFSSSSAISSADLFGDSGDSTIDLAASDLINRLHFQAQQDISSLKNIAGETGKKLSSLASSLMTDLQDRIL | 402 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g02957 | 402 | PRINTS | HIV Rev interacting protein signature | 41 | 58 | IPR001164 | GO:0005096 | |
Tsu04g02957 | 402 | PRINTS | HIV Rev interacting protein signature | 62 | 83 | IPR001164 | GO:0005096 | |
Tsu04g02957 | 402 | PRINTS | HIV Rev interacting protein signature | 22 | 41 | IPR001164 | GO:0005096 | |
Tsu04g02957 | 402 | MobiDBLite | consensus disorder prediction | 167 | 181 | - | - | |
Tsu04g02957 | 402 | MobiDBLite | consensus disorder prediction | 157 | 235 | - | - | |
Tsu04g02957 | 402 | CDD | ArfGap_ArfGap2_3_like | 8 | 123 | - | - | |
Tsu04g02957 | 402 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 12 | 124 | IPR037278 | - | |
Tsu04g02957 | 402 | Gene3D | Arf GTPase activating protein | 3 | 141 | IPR038508 | - | |
Tsu04g02957 | 402 | SMART | arf_gap_3 | 10 | 126 | IPR001164 | GO:0005096 | |
Tsu04g02957 | 402 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED | 1 | 402 | - | - | |
Tsu04g02957 | 402 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 10 | 128 | IPR001164 | GO:0005096 | |
Tsu04g02957 | 402 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED | 1 | 402 | - | - | |
Tsu04g02957 | 402 | Pfam | Putative GTPase activating protein for Arf | 13 | 106 | IPR001164 | GO:0005096 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g02957 | Tsu-Chr4 | 36199025 | 36204878 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g02957 | 13 | 84 | C2H2 Transcription Factor Family | AT3G07940 | 46.575 | 2.97e-18 | 82.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g02957 | K12493 | K11855 | gmx:100789796 | 643.654 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu04g02957 | 04 | 36199025 | 36204878 | Tsu04g02957 | 04 | 36199025 | 36204878 | ECH |