Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g02915 | ATGGAGCTATTTCCAGCACAACCAGATTTGTCATTACAAATCAGTCTTCcaaacacaaaacaaacaacaaattggAGTAAAaattcagatgatcaagaagatatagattttggattttggaaaaGTGCTTTTGAGTCCAAAACAGATTCAAATTACACCTTtgatctttctctctctaatccAAGGGTTTCTTCTTCTACTACAACTTCAAACCTCAACAATCTCATAACTCACTCTTTTCAAAACACTAATAATTCAATCAACAACCCTTTTCAACACTttcatcaaaaccaaaacaattacCAAACCCTAAATGATGAGCTAGGTTTTCTTAAACCTATAAGAGGAATTCCAGTTTAtcatcaaaatattcaaaaccCTCCTATTGGATTATTTTCTCAACCATCTTTTAATGCTTCTGTTTCAAATTCAACAACAACTTTTCATTCTCAAGTACCAATGAATAGATCAAAGTTTTTGCCGCGGTTTCCTTCGAAGCGTAGCATGAGAGCTCCGAGGATGCGTTGGACTACTACTCTTCATAATCGATTTGTTCATGCTGTTGAGCTTTTGGGTGGCCATGAaaGAGCTACACCTAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTAACGTTATCACATGTTAAGTCTCATTTGCAGATGTACCGGACGGTTAAAATTACAGATAGAGCAGCAGTATCACCAGGAATAGGACAATCTGATATGTATGAAAATGGTTCATCTGGAGACACTTCTGAAGACTTCATGTTTGACATAAACTCTTCAACAAGGTCTAATGATCTATCCATTATTAAAGATAAAGATAATTGTGGCATTGTGAGAAACTCTTCAAGGGAAGCTTGGTTGCATGGTAACCCAAAGGTTCATCCTATTGAAAATGTGTCTTCTCTTGAGgGAATGGATCCAAATTATCTAAGCAACGAAAGAACTTCATCAGATGTAAGCTCTTCCTCAAATATTTCAGGAACAAGCCTCAAGAAACCAAATTTAGATTTGGAATTCACCTTAGGCACATCACTTTGA | 1047 | 0.3209 | MELFPAQPDLSLQISLPNTKQTTNWSKNSDDQEDIDFGFWKSAFESKTDSNYTFDLSLSNPRVSSSTTTSNLNNLITHSFQNTNNSINNPFQHFHQNQNNYQTLNDELGFLKPIRGIPVYHQNIQNPPIGLFSQPSFNASVSNSTTTFHSQVPMNRSKFLPRFPSKRSMRAPRMRWTTTLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKITDRAAVSPGIGQSDMYENGSSGDTSEDFMFDINSSTRSNDLSIIKDKDNCGIVRNSSREAWLHGNPKVHPIENVSSLEGMDPNYLSNERTSSDVSSSSNISGTSLKKPNLDLEFTLGTSL | 348 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g02915 | 348 | MobiDBLite | consensus disorder prediction | 300 | 330 | - | - | |
Tsu04g02915 | 348 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 1 | 345 | IPR044847 | GO:0000976|GO:0006355|GO:0010158 | |
Tsu04g02915 | 348 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 172 | 225 | IPR006447 | GO:0003677 | |
Tsu04g02915 | 348 | Gene3D | - | 171 | 228 | - | - | |
Tsu04g02915 | 348 | Pfam | Myb-like DNA-binding domain | 173 | 224 | IPR001005 | - | |
Tsu04g02915 | 348 | MobiDBLite | consensus disorder prediction | 307 | 330 | - | - | |
Tsu04g02915 | 348 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 1 | 345 | - | - | |
Tsu04g02915 | 348 | SUPERFAMILY | Homeodomain-like | 169 | 225 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g02915 | Tsu-Chr4 | 35436217 | 35443499 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g02915 | 1 | 346 | G2-like Transcription Factor Family | AT4G17695 | 39.178 | 2.99e-51 | 171 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Tsu04g02915 | Myb_DNA-binding | 4.5e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g02915 | - | - | aprc:113868756 | 370.548 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu05g01227 | 05 | 11004733 | 11011326 | Tsu04g02915 | 04 | 35436217 | 35443499 | PCT |