Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02915 ATGGAGCTATTTCCAGCACAACCAGATTTGTCATTACAAATCAGTCTTCcaaacacaaaacaaacaacaaattggAGTAAAaattcagatgatcaagaagatatagattttggattttggaaaaGTGCTTTTGAGTCCAAAACAGATTCAAATTACACCTTtgatctttctctctctaatccAAGGGTTTCTTCTTCTACTACAACTTCAAACCTCAACAATCTCATAACTCACTCTTTTCAAAACACTAATAATTCAATCAACAACCCTTTTCAACACTttcatcaaaaccaaaacaattacCAAACCCTAAATGATGAGCTAGGTTTTCTTAAACCTATAAGAGGAATTCCAGTTTAtcatcaaaatattcaaaaccCTCCTATTGGATTATTTTCTCAACCATCTTTTAATGCTTCTGTTTCAAATTCAACAACAACTTTTCATTCTCAAGTACCAATGAATAGATCAAAGTTTTTGCCGCGGTTTCCTTCGAAGCGTAGCATGAGAGCTCCGAGGATGCGTTGGACTACTACTCTTCATAATCGATTTGTTCATGCTGTTGAGCTTTTGGGTGGCCATGAaaGAGCTACACCTAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTAACGTTATCACATGTTAAGTCTCATTTGCAGATGTACCGGACGGTTAAAATTACAGATAGAGCAGCAGTATCACCAGGAATAGGACAATCTGATATGTATGAAAATGGTTCATCTGGAGACACTTCTGAAGACTTCATGTTTGACATAAACTCTTCAACAAGGTCTAATGATCTATCCATTATTAAAGATAAAGATAATTGTGGCATTGTGAGAAACTCTTCAAGGGAAGCTTGGTTGCATGGTAACCCAAAGGTTCATCCTATTGAAAATGTGTCTTCTCTTGAGgGAATGGATCCAAATTATCTAAGCAACGAAAGAACTTCATCAGATGTAAGCTCTTCCTCAAATATTTCAGGAACAAGCCTCAAGAAACCAAATTTAGATTTGGAATTCACCTTAGGCACATCACTTTGA 1047 0.3209 MELFPAQPDLSLQISLPNTKQTTNWSKNSDDQEDIDFGFWKSAFESKTDSNYTFDLSLSNPRVSSSTTTSNLNNLITHSFQNTNNSINNPFQHFHQNQNNYQTLNDELGFLKPIRGIPVYHQNIQNPPIGLFSQPSFNASVSNSTTTFHSQVPMNRSKFLPRFPSKRSMRAPRMRWTTTLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKITDRAAVSPGIGQSDMYENGSSGDTSEDFMFDINSSTRSNDLSIIKDKDNCGIVRNSSREAWLHGNPKVHPIENVSSLEGMDPNYLSNERTSSDVSSSSNISGTSLKKPNLDLEFTLGTSL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02915 348 MobiDBLite consensus disorder prediction 300 330 - -
Tsu04g02915 348 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 345 IPR044847 GO:0000976|GO:0006355|GO:0010158
Tsu04g02915 348 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 172 225 IPR006447 GO:0003677
Tsu04g02915 348 Gene3D - 171 228 - -
Tsu04g02915 348 Pfam Myb-like DNA-binding domain 173 224 IPR001005 -
Tsu04g02915 348 MobiDBLite consensus disorder prediction 307 330 - -
Tsu04g02915 348 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 345 - -
Tsu04g02915 348 SUPERFAMILY Homeodomain-like 169 225 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02915 Tsu-Chr4 35436217 35443499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02915 1 346 G2-like Transcription Factor Family AT4G17695 39.178 2.99e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu04g02915 Myb_DNA-binding 4.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02915 - - aprc:113868756 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01227 05 11004733 11011326 Tsu04g02915 04 35436217 35443499 PCT