Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02884 ATGGGAATACACAAAAATCCTAGAACAACAAATGAAATTGTTGGAGAACAATATAGTCCATTGTTACATAGTAACAAAGATGATAAAATTGAAGTTGAAATTCAACAAAATGATGATGGATTCATTtgtaacaacaataataataatggttcATCAGCATCATTTACTGGTTCTGTGTTCaatttatcaacaacaattattGGTGCTGGAATCATGGCTTTACCTGCAGCCATGAAAGTTTTAGGCTTAACAATTGGTATTGCTTCAATAGTTTTCTTTGCTTTGCTTAGTCATACATCTTTGGATATTCTTATGAGGTTTAGTAGAGTTGCTAAGGCTCAATCTTATGGTGATATTATGGGATGTGCTTTTGGAAGTGTTGGAAGATTGGTTTTTCAGATTTCTGTTCTTGTTAATAACTTTGGTATTCTTGTTGTCTACAGCATCATAATTGGTGATGTACTGTCTGGAACAACTTCATCAGGAAGTCATCATTTCGGTGTACTTGAAGGATGGTTCGGCGAACACTGGTCGACTGGGCGGACTTTTGTTCTTCTTGTGACAACTCTTTTGGTATTTACTCCATTGGGATTCTTTAAGAGAATAGATTCATTAAGATATACTTCTGGTTTAGCAGTGGCTCTTGCAGTTGTTTTTCTTGTCATAACTGCAGGAATCACATTTGTTAAATTGTTCAATGGAAGTATAGAGAGTCCAAGATTGCTTCCTAATATTACTGATATGACATCTATTTGGAATCTATTCACAGCAGTTCCTGTTCTTGTCACAGCATTTGTTTGTCATTACAATGTGCATACAATAGACAATGAACTCGGAGACTCTTCACCAATACAACCAGTTATATGTGCATCACTGGTTCTATGTTCCGGCATATACATTCTTACAGCTTTATTTGGATTTCTACTATTTGGTGACGCAACTCTTGGTGATGTACTGGCCAACTTTGATACTGATCTTGGCATCCCTTATAGTAATGTGCTCAACGACATTGTTCGTATCAGCTACGCCCTTCACCTCATGCTTGTTTTCCCGGTTATCTTCTTTTCACTCCGCTTCAATTTGGATGATCTTGTGTTTCCCTCAGCCAAGTCATTGGAATTTGATAAGTTAAGGTTTTCATTGATCACTACTGGACTCATCATTTTGCTCTATGTGGCTGCAAATTTTGTACCTAGCATTTGGGATGTTTTTCAATTCACCGGAGCAACTGCTACTGTTTGCCTTGGTTTTATTTTCCCTGCTGCAATTGCTATAagGGATCCACAAAGCATTGCAACTAAGAAAGACAAAATTTTATCCATTGTGATGATTGTTCTTGCTGTCTTCTCAAATGTTGTGGCTATATACAGTAATGCTGATGCTTTGTTCAGAAAAGATCAAAGTAAATCAAATTGA 1416 0.3566 MGIHKNPRTTNEIVGEQYSPLLHSNKDDKIEVEIQQNDDGFICNNNNNNGSSASFTGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIASIVFFALLSHTSLDILMRFSRVAKAQSYGDIMGCAFGSVGRLVFQISVLVNNFGILVVYSIIIGDVLSGTTSSGSHHFGVLEGWFGEHWSTGRTFVLLVTTLLVFTPLGFFKRIDSLRYTSGLAVALAVVFLVITAGITFVKLFNGSIESPRLLPNITDMTSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDSSPIQPVICASLVLCSGIYILTALFGFLLFGDATLGDVLANFDTDLGIPYSNVLNDIVRISYALHLMLVFPVIFFSLRFNLDDLVFPSAKSLEFDKLRFSLITTGLIILLYVAANFVPSIWDVFQFTGATATVCLGFIFPAAIAIRDPQSIATKKDKILSIVMIVLAVFSNVVAIYSNADALFRKDQSKSN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02884 471 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 12 469 - -
Tsu04g02884 471 PANTHER AMINO ACID TRANSPORTER 12 469 - -
Tsu04g02884 471 Pfam Transmembrane amino acid transporter protein 53 457 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02884 Tsu-Chr4 34898540 34902127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02884 8 470 Amino Acid or Auxin Permease AAAP Family AT3G30390 59.179 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02884 K14207 - gmx:100778699 664.07