Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02865 ATGGTTATGACAGTAGATACCAGAGGTGGAGATGAAGTTGTCGGTGATGTGGCTAGTGTCGGTGCAGTCAATGAAGTAATGGAAGCTTACTTTGAAGCATTGAATGAAATAACCCAAGAGATGAATGGTAATAGAGGAGATGAGGATGCAGACGAAGAAGATTCGAATGTCAATGTTGATAACTCTGTGGATGATTGTAATGGTGAAGAGGATAATGAAGATAATGGTTATTCTGAGGGGGTTGAGTTTGATGGTGATGAAAGTGATTATGGTTATTCTGAGGATTTGTGCGATAGAGACAATACAATTGTTTATGATGATGTGCACGAAGATTCAGATACAATCAATGAAGATTCAGATACTGTCAACGAAGCTACAGATTCCGATCAAAATCCAGaagatttatttataattgatgatgttgatgatattgTGAAGGTCGACATGTTTAACTTGGACAATAATGATGTTTCGAAGTTGGAATTTGGTAATTTGGTGGTTGCCTACAAATTTTACTGTTGGTTTGCAAAGATGAATGGTTTTGTTGTTCGCAAAGGgcaaattattaaaaacaagtttagGGAGGTTGTTCAACAAACATTCGTTTGTAACCTAGAAGGGTTTAGGAAAGACACTTGTTTAACAGAAGAGACGCACAAGCGTGGTCCAAAACACGAAACCAGATGCGGTTGCGGAGCAAAATTTCGAGTTCACATTGATATAATTACACGTCGTTGGTACGTCACAGTTTTCTGTTTTGACCACAATCATGAAATGTTGACGGAAAAGCATTGTGGCCTGTTGGCCGCTCATAGGAAGTTGACAAAATCAGATAAGATTCAAATTAAGAACTACGGCAATGCAAGAATTAAGGCTACTCAAATGATAGGTGCATTTGCCAATGCTGCTGGGGGTTATGAGAAGGTAGGTTTTTTGAAGAAGGATTTACATAATCAAATTCTGAGGCAGAGAAAAGAAAATTCTTCTGATGCTAAAGGTGCTGTTAAGTACCTTGTTGGTCTTAGGGTTAAAGATCCATTGATGTTTGTTGCACATACTGTTGATGGCAGTGGTAGGTTGCAAAACTTGTTCTGGTGTGATGGCGAAAGTCAAAAGAATTATCAGGTTTTTGGGGACGTGCTTGCTTTTGATGCtacatataacaaaaataagtaCAAGTGTCCCTTTGTTGTGTTTTTTGGTGTTAATCATCACAACCAGACAATTATTTTTGCTACTGCTGTAGTTTCCAATGAGGTTGAAGGTACATATGTTTGGTTGTTGGAGCAATTCAAGGCTGTAATGAAAGGCAAGACACCTATTTCTGTAATAACGGATGGTGATGTAGCTATGAGGAATCCAATCAAAAGAGTATTTCCTAATAGTTATCATAGGTTATGTGCGTGGCACCTTCTCCGCAACGCAATGTCCAACATTGGTAATGCTGATTTTATCCCACACTTCAAAAAATGTATGCTTGGTGATCACTAG 1491 0.3709 MVMTVDTRGGDEVVGDVASVGAVNEVMEAYFEALNEITQEMNGNRGDEDADEEDSNVNVDNSVDDCNGEEDNEDNGYSEGVEFDGDESDYGYSEDLCDRDNTIVYDDVHEDSDTINEDSDTVNEATDSDQNPEDLFIIDDVDDIVKVDMFNLDNNDVSKLEFGNLVVAYKFYCWFAKMNGFVVRKGQIIKNKFREVVQQTFVCNLEGFRKDTCLTEETHKRGPKHETRCGCGAKFRVHIDIITRRWYVTVFCFDHNHEMLTEKHCGLLAAHRKLTKSDKIQIKNYGNARIKATQMIGAFANAAGGYEKVGFLKKDLHNQILRQRKENSSDAKGAVKYLVGLRVKDPLMFVAHTVDGSGRLQNLFWCDGESQKNYQVFGDVLAFDATYNKNKYKCPFVVFFGVNHHNQTIIFATAVVSNEVEGTYVWLLEQFKAVMKGKTPISVITDGDVAMRNPIKRVFPNSYHRLCAWHLLRNAMSNIGNADFIPHFKKCMLGDH 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02865 496 Pfam MULE transposase domain 380 474 IPR018289 -
Tsu04g02865 496 PANTHER OS02G0262500 PROTEIN 160 490 - -
Tsu04g02865 496 Pfam FAR1 DNA-binding domain 170 260 IPR004330 -
Tsu04g02865 496 MobiDBLite consensus disorder prediction 42 92 - -
Tsu04g02865 496 MobiDBLite consensus disorder prediction 46 91 - -
Tsu04g02865 496 MobiDBLite consensus disorder prediction 112 132 - -
Tsu04g02865 496 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 160 490 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02865 Tsu-Chr4 34586995 34588578 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu04g02865 MULE 1.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02865 - - gmx:102662272 406.757