Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02828 ATGGCTTCATCAATCAAAATCTCAAAGCTCATCTCTCGTTCAATTTCCTCTGCTTCTTCTACCTCCTTCTTTTCTCGTGGTGGTAATGGTTATCTTGGTGGATTGCTCTCTAAATATAGCACTGCTGCTGCATTTGATGAACAACCAATTAAACCATCCGTGCAAGTAGAACACACACAACTCTTAATTGATGGTAAATTTGTGGATGCTGCTGCTGGTAAAACATTTCCAACATTGGATCCAAGGACCGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCTGTTGCAGCTGCACGGAAAGCATTCGATCTAGGACCGTGGCCTAAATTGCCAGCCTATGAAAGGCAAAGGATATTGTTGCGTGCTGCTGATCTGATTGAAAAGCATAATGACGAAATTGCAGCACTTGAGACTTGGGATAATGGGAAGCCGTACGAACAATCTGCTCAAATTGAAATTCCAATGCTGGCTCGACTATTTCGTTACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACAGTATCATGTGCAGACATTGCACGAACCAATCGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTGGGACCCGCATTAGCATGTGGCAACACTGTCGTTCTGAAAACTGCTGAGCAGACACCATTGTCTGCTTTGTATGTGGCAAAACTATTTCATGAGGCTGGACTTCCTCCTGGTGTGTTGAATATTGTGTCTGGCTTCGGTCCAACTGCCGGTGCTGCTCTTGCTAGTCACATGGATGTAGATAAGCTTGCATTTACTGGCTCAACCGATACCGGAAAGGTTGTCCTTCAACTGGCAGCTAAAAGCAATCTTAAACCTGTAACTTTGGAGCTTGGTGGGAAATCTCCGTTTATTGTTTGTGAAGACGCTGATGTAGATGAAGCTGTTGAGCTAGCTCACTTTGCCTTATTCTTCAACCAGGGACAATGTTGTTGTGCTGGCTCTCGAACGTTTGTACATGAATGCGTGTATGACGAGTTTGTCGAGAAAGCAAAGGCCCGTGCTTTGAAACGTGCTGTTGGCGATCCATTCAAGTCAGGAACAGAGCAAGGTCCTCAGATTGATTCAAAGCAATTTGAGAAAATACTGAAATATATTAGATCTGGTGTTGAAAATGGTGCTACACTTGAAACCGGAGGAGAAAGGCTTGGCAGCAAAGGATTCTATATTCAGCCTACTGTCTTCTCAAATGTTCAGGATGGTATGCTGATTGCAAAGGAAGAAATATTTGGTCCAGTGCAATCCATATTTAAATTCAAGGACCTTGGCGAGGTAATTCAAAGAGCAAACAACACAAGGTATGGTCTTGCAGCAGGGGTGTTCACAAAGAACATAGACACTGCAAATACTCTGACTAGAGCATTGAGAGTTGGAACAGTTTGGGTGAATTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGTGGTTATAAGATGAGTGGACAAGGCAGAGAAAAAGGAGAATACAGTCTTAAGAACTACTTGCAAGTGAAGGCTGTTGTTACACCCTTGAAGAATCCTGCATGGCTTTGA 1620 0.437 MASSIKISKLISRSISSASSTSFFSRGGNGYLGGLLSKYSTAAAFDEQPIKPSVQVEHTQLLIDGKFVDAAAGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDLGPWPKLPAYERQRILLRAADLIEKHNDEIAALETWDNGKPYEQSAQIEIPMLARLFRYYAGWADKIHGLTVPADGQYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYVAKLFHEAGLPPGVLNIVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHECVYDEFVEKAKARALKRAVGDPFKSGTEQGPQIDSKQFEKILKYIRSGVENGATLETGGERLGSKGFYIQPTVFSNVQDGMLIAKEEIFGPVQSIFKFKDLGEVIQRANNTRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02828 539 SUPERFAMILY ALDH-like 54 533 IPR016161 GO:0016491
Tsu04g02828 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 500 IPR016163 GO:0016620
Tsu04g02828 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 529 IPR016162 GO:0016491
Tsu04g02828 539 CDD ALDH_F2BC 56 531 - -
Tsu04g02828 539 Pfam Aldehyde dehydrogenase family 68 529 IPR015590 GO:0016491
Tsu04g02828 539 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 33 539 - -
Tsu04g02828 539 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Tsu04g02828 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 333 344 IPR016160 GO:0016491
Tsu04g02828 539 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 33 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02828 Tsu-Chr4 33489669 33494382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02828 6 539 Aldehyde Dehydrogenase Gene Family AT3G48000 78.090 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02828 K00128 - gmx:100777399 965.681