Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02805 ATGTTGTGCTATGTTTCTTCTCCGATTGTTGTGGAAGCTGGCCATAATAAAAGAAGGAGAAAAACAAATCAGGATGCTGTTCCTAATGGAAGTTCACCAAATGATGATCAGACTAGTAGTTATCTGTTGATAAGTTTGTTGAAGATACTTTCAAATATGCAGCCTGAGAGATCAAATCAAACTGCAAATCAGGATCTTCTTACTCATCTTTTAAGGAGTCTTGCCAATCAGAATGGTGGACAAGGGGGAAGGAACTTGTCTAACATCTTAGGTTGGATTGATAGTGCTGATGTATTGGAAAATGTCGCGTATGCAGAGTATGCAATCAAAGTTGCTGGTCAAGAAAATTTGTTAAGAGAAATTAGAGCCTCTGCAATCTCAGTAAATACTTTGTCCAATATGCATCTTCTGCCAGGACAAGTGCTGATAACTTCTGAACCCTTGGAACAACTACCACATTTAGGATCCTCTTTGGTAGCAAGGTTAAAAATTAACTTGCCTTCTGTTACTGGAGGTATAGTTAACCAGTATATTCAGCTACTGAAAAACCAAGGAGAAGCTTATGAGATAGAGGAAgaggaagtgaagaagaagaaaaggaagagattggtgAAAGCTTGTGAAAAGAATATTACTGCTAAGGTTGAAAGCAAAGGAAAGGTCAGGTCTAAGGCTGAGAGTTCAAAAGGTGTGATTATTGTGGATGATGCTGAGGATGAGGAAGACAATGAACCcttgaaaatgaagagaaagagaatttccaaggagctgaagaagaagactGCTGAGAGCTCCACTATTGCTGAAACAGGTAATGTATCTACTCCTAAAGATACTGTTACAATAACTCAATATATTCAGAATCCCCCAATCACAATTAACCCCTCAGAATCACCTTTAGACTTTCTAGAACAACATCTGCAAGGTGAACTACCTCCACAATCTGAACCAACAACAAAGCCATCTGATCATGTTCAGAACTCTAAAATCATACCAGACTCTAAACAAGATAAGAACTCCAACACAAACCTAAACCAAACATTTTCTGAACCAAACTCACCTGCTGAACAAATTATATCAGAATCTGttcaaacacaacctgaacccaTCATCTcaccaaaacacacaataccAGAACAACTAATTCAACCAGAACCAGAAATTagcacacatactgaagtgcTTGTAACTGGAGATCATTCAAATGACTTAGTAAACACTAAAGTATTACAGTTAGTTGAATCCCCCAACTCACCAGAAAGATCACAAGTTGATctaatgattaatgaacttCACACCTCTGACTTTCAACTAAGTTCATTAAATCAACTCAATGAAACACAaccagaacaacaacaacaaccaaaacaacaacaacaaaaaataccaACCCAACACTGTTctgctgctgagaaaacccaagaggttgggacatcaTCAGCATCAGACTTTGTTGAAAACCAAAATTCCAATCAACCATAA 1482 0.3138 MLCYVSSPIVVEAGHNKRRRKTNQDAVPNGSSPNDDQTSSYLLISLLKILSNMQPERSNQTANQDLLTHLLRSLANQNGGQGGRNLSNILGWIDSADVLENVAYAEYAIKVAGQENLLREIRASAISVNTLSNMHLLPGQVLITSEPLEQLPHLGSSLVARLKINLPSVTGGIVNQYIQLLKNQGEAYEIEEEEVKKKKRKRLVKACEKNITAKVESKGKVRSKAESSKGVIIVDDAEDEEDNEPLKMKRKRISKELKKKTAESSTIAETGNVSTPKDTVTITQYIQNPPITINPSESPLDFLEQHLQGELPPQSEPTTKPSDHVQNSKIIPDSKQDKNSNTNLNQTFSEPNSPAEQIISESVQTQPEPIISPKHTIPEQLIQPEPEISTHTEVLVTGDHSNDLVNTKVLQLVESPNSPERSQVDLMINELHTSDFQLSSLNQLNETQPEQQQQPKQQQQKIPTQHCSAAEKTQEVGTSSASDFVENQNSNQP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02805 493 MobiDBLite consensus disorder prediction 311 371 - -
Tsu04g02805 493 MobiDBLite consensus disorder prediction 446 493 - -
Tsu04g02805 493 MobiDBLite consensus disorder prediction 254 274 - -
Tsu04g02805 493 MobiDBLite consensus disorder prediction 310 371 - -
Tsu04g02805 493 MobiDBLite consensus disorder prediction 14 38 - -
Tsu04g02805 493 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 13 100 - -
Tsu04g02805 493 Coils Coil 178 201 - -
Tsu04g02805 493 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 100 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02805 Tsu-Chr4 32720028 32724921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02805 13 86 SBP-box Gene Family AT3G60030 63.514 8.28e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02805 - - lja:Lj1g3v4830490.1 130.954