Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02782 ATGTTTACATGCATAGCTTGTACGAAACAAACATCAGATGAGAGGGATGAAGATGGGCGTGAGAGTGGCACGCCTAATACTAAAGAAGCCGTCAAAAGCCTTACTACTCAGATAAAGGATATGGCGCTAAAGTTTTCGGGTGCTTACAAGCAATGCAAACCCTGCACAGGAGGATCAAGCAGCTACAACAAGAAGGGACATAGACCATATCCAGATTTTGACACAATCTCAGAAGGTGTTCCATATCCTTATATTGGAGGTGCAAGTTCAAGTTCAACTCCTGCATGGGACTTCACTACCTCTAACTACCCTGGTGCAAGATATGCTGGAGACCGTACCCCTAGAGGACGCGATTCTGCATCCGTCTGTGATGTAGTGTTAGAGGATGAGGATGAACCTAAGGAATGGATGGCACAGGTTGAGCCAGGGGTTCATATTACCTTTGTTTCTCTTCCTAATGGTGGAAATGATCTCAAGAGAATTCGTTTCAGCCGTGAGATGTTCAATAAATGGCAAGCTCAAAAATGGTGGGGCGAGAATTACGACAGAATCATGGAACTTTACAATGTCCAACGATTTAATAGACAAGCTCTCAACACTCCTCCAAGATCTGAGGCCGATGAGCAAAGAGATTCTACTTACTCAAGATTGACATCGGCAAGAGAAAGTCCTATGGCATCAGTTAAGGATTGGACACCAAGAAGTCACTACAAACCATCTGGACAGTTGGATCAAGGCGGAGGCCACCACTTTCAAGCAGGGTCATCTATGGAACCATCAAGGGCAACAACATCATCTAGAGATGAACCTTCTATTAGCAATGCAAGTGAAATGGAGTCAGAATGGGTAGAACAAGATGAGCCTGGAGTTTACATTACAATCAGACAGTTAGCTGATGGTACTAGGGAACTTAGACGTGTCAGATTCAGCCGGGAAAGATTTGGCGAGGTAAATGCAAAAACATGGTGGGAAGAGAACAGAGAAAGAATACAATCTCAATACCTTTGA 1008 0.4405 MFTCIACTKQTSDERDEDGRESGTPNTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGGSSSYNKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSNYPGARYAGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQKWWGENYDRIMELYNVQRFNRQALNTPPRSEADEQRDSTYSRLTSARESPMASVKDWTPRSHYKPSGQLDQGGGHHFQAGSSMEPSRATTSSRDEPSISNASEMESEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQSQYL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02782 335 MobiDBLite consensus disorder prediction 10 25 - -
Tsu04g02782 335 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 335 IPR044532 -
Tsu04g02782 335 MobiDBLite consensus disorder prediction 256 279 - -
Tsu04g02782 335 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Tsu04g02782 335 Pfam Transcription factor regulating root and shoot growth via Pin3 279 334 IPR013591 -
Tsu04g02782 335 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Tsu04g02782 335 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 335 - -
Tsu04g02782 335 MobiDBLite consensus disorder prediction 10 29 - -
Tsu04g02782 335 ProSiteProfiles BRX domain profile. 280 335 IPR013591 -
Tsu04g02782 335 MobiDBLite consensus disorder prediction 198 284 - -
Tsu04g02782 335 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02782 Tsu-Chr4 32373872 32379261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02782 1 335 Major Intrinsic Protein MIP AT1G31880 68.156 2.54e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02782 - - ccaj:109789470 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02782 04 32373872 32379261 Tsu04g02782 04 32373872 32379261 ECH