Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g02764 | ATGGCTGACAATGGTGATGATCAACCTTTGTTCAGTAGTAAATTTGGTGTGATACTAATTGCTATGGGTTCAGCTAGTTTTGTGGTAACAATGTACCATCTCATAGTCATTTGTTGCCAAAACTCAGCCGAACAAGCGCGGCAAAACGAGCAACCGGCAACACAAACACCGAGTGTCGAAGAGGGTTGTTTAGGGTCACATCAAATTCCATCTCACAAgtatgagaagaagaaaaagaatgatgaaaatgatgaagatgattgtGTGACTTGTGCTGTTTGCTTGGGAGATTTTGAAGAGGGTGAAGAGTTGAGAACTATGCCTTCTTGCATGCATTCTTTCCATGTACCATGCATAGATATGTGGctaatttcacattttaattgTCCTATTTGTCGGGCCGATGCCACGCCCTCCCCGGTCGTGCCTCGGAGTTTACCGGAGGTTGAATCCACCGAGGTGAATGTTGATCAAGGCATAAATGTGGTGCAAATAGTTGTCGTCCAAAATGATGTGCAAAATAGGTTACCGGTATAG | 537 | 0.3985 | MADNGDDQPLFSSKFGVILIAMGSASFVVTMYHLIVICCQNSAEQARQNEQPATQTPSVEEGCLGSHQIPSHKYEKKKKNDENDEDDCVTCAVCLGDFEEGEELRTMPSCMHSFHVPCIDMWLISHFNCPICRADATPSPVVPRSLPEVESTEVNVDQGINVVQIVVVQNDVQNRLPV | 178 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g02764 | 178 | SUPERFAMILY | RING/U-box | 76 | 139 | - | - | |
Tsu04g02764 | 178 | ProSiteProfiles | Zinc finger RING-type profile. | 91 | 133 | IPR001841 | - | |
Tsu04g02764 | 178 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 2 | 142 | IPR044675 | - | |
Tsu04g02764 | 178 | PANTHER | CHROMATIN REGULATOR PHD FAMILY-RELATED | 2 | 142 | - | - | |
Tsu04g02764 | 178 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 140 | IPR013083 | - | |
Tsu04g02764 | 178 | SMART | ring_2 | 91 | 132 | IPR001841 | - | |
Tsu04g02764 | 178 | Pfam | Ring finger domain | 90 | 133 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g02764 | Tsu-Chr4 | 32112547 | 32113083 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g02764 | 17 | 137 | C3H Transcription Factor Family | AT5G17600 | 39.394 | 3.34e-19 | 81.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g02764 | - | - | lja:Lj0g3v0111029.1 | 166.392 |