Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02760 ATGAGGCCacgcaacaacaacaataacagattcattttcaatttcaacaacaaccATTATTCAAGCACTACCGAATCACGGCGACGAAGAATCGCGTTTCCGAAGCGATTATTACTCGATTTAATGGCGGGACAATCAAGGAAATGGATGATCCTTGTTGTTACGATATGGATTCAAGCATTTACAGGAaccaattttgatttttcacaATATTCATCGTCGTTGAAATCTGCACTTGAGATTTCTCAGGTTCAGCTTAATTACTTAGCTACTGCAAATGATATGGGAAAGGTTTTTGGTTGGTCTTCTGGTTTAGCTCTTATGCATCTTCCTGTTTCGGTTGTTATGTTTATTGCAGCTTTTATGGGGTTTCTTGGTTATGGTCTTCAATGGCTTCTTATCAATCATCTCATTTCTTTGCCTTATTTTCTGGTGTTTCTTCTGTGTCTTTTAAGTGGCTGTAGCATCTGCTGGTTCAACACAGTATGTTTTGTGCTCTGCATTAGGAATTTTCCGATTAACCGAACACTTGCATTATCACTTACTGTGAGTTTCAATGGTGTTAGTGCAGCCCTTTACACCCTTGCTGCCAATTCAATAGACCCTTCGTCTGATTCACTGTATCTTCTTTTGAATGCTATTGTTCCCCTTCTTGTTTGCATTGCAGCAGTTATTCCGATTCTCCGCCAACCGCCTTTAGATCCTCACCCTCCTGATGCAATTAACCGGGACTCGTTAATATTTCTAATCTTGAACTTCTTAGCCATTTTCACTGGCCTTTATCTACTCTTGTTTGGTGCATCTGCTTCTTCTATGGCTTCCTCTCGGCTCCACTTTGGTGCAACTATTCTTCTCCTCACCCTCCCGTTGTTTATTCCTGGCATTATATATGCTCGCTCGTGGGCTCAGCGTACCATCCATTCCAGCTTTCGGATAGAAGGATCCAGCTTCATTCTTGTTCATGATGATGATCTTGAGCTGCACAAAGAACTACTTAGCCGTCACGGTAGTCTTGTTGGTAATGGAGATGGCAATGGAGATGCTTATAGCCTGCAAAGTGACAATGGATCCATGTTTTCAAGTTGGAAGGAAAGCGGTAATGATGTGTGTTGTGAAAGGATGATTGGCCAGGATCAGTTGACAATGCTAGGAGAAGAGCACTCAGCTGCAGTGATTGTCCGAAGATCAGATTTTTGGCTATACTACATTACATACTTCTGTGGAGGTACAATTGGTCTTGTCTATAGCAATAATCTGGGACAAATTGCTCAATCTTTAGGCCTGAGTTCAAGTACTTCTACCCTTGTTACTCTATATGCATCCTTTTCGTTTTTCGGCCGCTTGCTTTCAGCTGTACCAGACTATATTCGTAGTAAGTTCTACTTTGCAAGAACTGGTTGGATCTCCGTCGCACTTATACCAACACCAATTGCGTTCTTCTTGCTCGCTGCATCAGGCTCTTCTCTGGCTCTGTATACAGGCACTGCACTAATAGGGTTGAGTTCTGGCTTCATATTTGCAGCTGCTGTTTCAGTTACATCTGAACTATTTGGACCCAACAGTGTAGGTGTCAATCACAACATTCTCATAACAAATATCCCAATTGGTTCACTTCTCTATGGTTTTCTTGCCGCACTAGTTTATGATGCCAATGCACAGTCAATACCGGGAAACTTTACAACATCTGACTCAGTAGTTTGCATGGGAAGGGAATGCTACTTCTGGACATTTGTATGGTGGGGATGCATATCTGTCCTGGGACTAGGTTCTAGTGTGTTGTTATTCCTAAGAACCAAACATGCATATGAACATTTTGAGAAACACCGTATTACGACGCAAGTTATTGTGTCTTAA 1854 0.4061 MRPRNNNNNRFIFNFNNNHYSSTTESRRRRIAFPKRLLLDLMAGQSRKWMILVVTIWIQAFTGTNFDFSQYSSSLKSALEISQVQLNYLATANDMGKVFGWSSGLALMHLPVSVVMFIAAFMGFLGYGLQWLLINHLISLPYFLVFLLCLLSGCSICWFNTVCFVLCIRNFPINRTLALSLTVSFNGVSAALYTLAANSIDPSSDSLYLLLNAIVPLLVCIAAVIPILRQPPLDPHPPDAINRDSLIFLILNFLAIFTGLYLLLFGASASSMASSRLHFGATILLLTLPLFIPGIIYARSWAQRTIHSSFRIEGSSFILVHDDDLELHKELLSRHGSLVGNGDGNGDAYSLQSDNGSMFSSWKESGNDVCCERMIGQDQLTMLGEEHSAAVIVRRSDFWLYYITYFCGGTIGLVYSNNLGQIAQSLGLSSSTSTLVTLYASFSFFGRLLSAVPDYIRSKFYFARTGWISVALIPTPIAFFLLAASGSSLALYTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANAQSIPGNFTTSDSVVCMGRECYFWTFVWWGCISVLGLGSSVLLFLRTKHAYEHFEKHRITTQVIVS 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02760 617 Gene3D MFS general substrate transporter like domains 5 234 IPR036259 -
Tsu04g02760 617 Pfam Nodulin-like 48 293 IPR010658 -
Tsu04g02760 617 SUPERFAMILY MFS general substrate transporter 387 600 IPR036259 -
Tsu04g02760 617 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 617 - -
Tsu04g02760 617 PANTHER NODULIN-LIKE/MFS TRANSPORTER 30 617 - -
Tsu04g02760 617 SUPERFAMILY MFS general substrate transporter 31 231 IPR036259 -
Tsu04g02760 617 Gene3D MFS general substrate transporter like domains 393 608 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02760 Tsu-Chr4 32091288 32096032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02760 25 611 Nodulin-like Gene Family AT1G31470 56.537 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02760 - - cam:101496594 1013.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02760 04 32091288 32096032 Tsu04g02760 04 32091288 32096032 ECH
Tsu05g01079 05 9473365 9478079 Tsu04g02760 04 32091288 32096032 PCT