Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02757 ATGACTTGCATAGTTGAACGAAGGATTGAACTTCGACACGACCTAAATGGCCAAGATGAGCTTGTTGAGTTTGAGtttcattcattcatcacctatttcttcttcttcttctattcaaGAATGAAATATACAAGAATGGACCAATTGTTAAGTCTTGTGATATGTACACTGCTATTACTAAAAGCAGCTGAAGGGGTTACTGTGCCAATGGAGTTGGGTGTGCCAATCACTTATCTTCAAAGTGCAGTTGCAAATGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTTGATAAGGGATTTGAAGGTGGCATTGACAATTGGATTCTTCATTTTGAGGGAGGAGCATGGTGCAACAATGCCACTAATTGCCTTGCACGAGCGGACACTAATAGAGGATCATCGAAGAAAATGGAAACAACACTTATCTTTTCCGGGATTTTTAGTAACAACAAAACGTTTAATCCAGATTTCTACAATTGGAACAGAATCATGGTTAGGTATTGTGATGGTTCATCATTTACCGGTGATGTTGAAGCTGTCGATCCAGCAACCAATTTGCACTACAGAGGAGGAAGGATTTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAACGCAATTCTCTCTGGATGTTCCGCTGGAGGATTGACTACTATTTTACATTGCGATCGCTTCAAAACTTTACTACCTTCAGCAACTAAAGTTAAATGTGTCTCAGATGCTGGTTATTTTATCAATGTaAAGACTATCTCTGGATCACCATACATTGAACAATTCTACAATCAAGTTGTTCAAACTCATGGCTCGGCAAAGAACTTGCCTTCATCTTGTACTTCAAGACTCTCACCAGGGCTGTGTTTTTTCCCGGAAAACGTGGCCGCAGATATCACGACTCCGATCTTCTTTGTAAATGCAGCCTATGATTCATGGCAGATTAGGAACATTTTGGTACCCGATGTTGCTGATCCCAACGGGACTTGGACGAACTGCAAACGTGATATAATCAAATGTTCACCTAATCAATTAACTACAATACAAGGTTTTAGAACAGATTTCTTAAAGGCAATTAGTGTGATTAATAACTGTCCATCTAAAGGAGCGTTTATAGATAGTTGCTATTCCCACTGCCAAACTGGAGGTCAGGAAACATGGATGAGTAATGACTCTCCACTGGTGGCCAATACTACAATAGCAAAGGCAGTAGGAGATTGGTATTTTGAGAGAAGGACTTTTCATCAGATAGATTGTCCTTACCCTTGCAACCCTACTTGTCATAACTCATAA 1311 0.3883 MTCIVERRIELRHDLNGQDELVEFEFHSFITYFFFFFYSRMKYTRMDQLLSLVICTLLLLKAAEGVTVPMELGVPITYLQSAVANGAVCLDGSPPAYHFDKGFEGGIDNWILHFEGGAWCNNATNCLARADTNRGSSKKMETTLIFSGIFSNNKTFNPDFYNWNRIMVRYCDGSSFTGDVEAVDPATNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTTILHCDRFKTLLPSATKVKCVSDAGYFINVKTISGSPYIEQFYNQVVQTHGSAKNLPSSCTSRLSPGLCFFPENVAADITTPIFFVNAAYDSWQIRNILVPDVADPNGTWTNCKRDIIKCSPNQLTTIQGFRTDFLKAISVINNCPSKGAFIDSCYSHCQTGGQETWMSNDSPLVANTTIAKAVGDWYFERRTFHQIDCPYPCNPTCHNS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02757 436 PANTHER PECTIN ACETYLESTERASE 43 435 - -
Tsu04g02757 436 Pfam Pectinacetylesterase 73 419 IPR004963 GO:0016787
Tsu04g02757 436 PANTHER NOTUM-RELATED 43 435 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02757 Tsu-Chr4 32051872 32059089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02757 45 435 Carbohydrate Esterase AT4G19420 53.991 9.04e-176 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02757 K19882 - gmx:100781246 610.527