Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02751 ATGGACCTAAAGAAAAGGAACACCAAGAAGTACAGCTTCAAGGAACCAGACCTTTCCCGACTAAGAGAGCTAGGAGCTCTAGTTCCATTCCCCGAAGATTTTCAAAAGCGATATGGGAAACTTTTGAACATCCTCAATACCAATGTTGAAGAGGGAATTCTTAATACACTCGTCCAGTTCTATGATCCAATTTACCACTGCTTTACTTTTGTCGATTATCAGTTGGTTCCTACTCTAGAGGAGTATTCttattgggttggtttgccgATCTCCGAAAGGAAATATGGCTTGCCTCCTCACCTTAGGCCAAGGACTTCTAATGTGAATAATGCAACTCTTGAGGGAGGGTTTGAAGATACTCCTTCATCAAGTTCTACATCAACCTCTGCATCAAGCTCTACAGGTCCTACTATTACTCAAGACCAAGCTCTGCAGCTAATAAGTCTTCTTCAGAACTCATTCCCTAGCCAAGATTTGGCCACTACTGCTTCTAATCAGGTTTGCTCCAATGATTTCACTGGTCATACATCAGTGAATCAAGGTAAGTTTCCTAATCTTTTTCATTCATGTAGCTTAGGTTCTTGGATTTTAGACTCTGGTGCAAGTCACCACATGTGTAACTTCACTCAGTGGTTTCTATCATATAAAGAAATCACTCCTATCAAAGTAAAATTACCTAATGGAAATTTTGTTCTAGCTAAACACTCAGGCACCATTCAATTTTCCCCAAAATTCATAATCACTGATGTACTTTGTGTTCCCAATTTTTCAGTAAATCTCCTATCTGTGTCACAACTGTGTAAACTAGCCAAATATTCAATCAAGTTTAATGGTTTTCAATGTTTCATTCATGATCAGGATACCAAGATGATGATTGGTTCTGCTGACGTGTTTAATGGATTATACTATCTTAAGCTTGCAGATAAGGAGGTACATGCTCATACTGTTAGTGCAACAACTCCTCTCATCACTACCTTACCAGAGAGAGCAATATGGCATTTTAGACTAGGACATATTTCCCTAAATAGAATGAATTTACTACATAGTCAATTTCCTTACATAGTTGTAGATAATAAAGGTGTATGTGACATATGTCACCTTGCTAGACAAAAGAAAATTCCTTACAGTACTAGTACAAATAAAGCTTGTAATCCATATGAGATAATGCATTTTGACATTTGGGGACCTCTTGCAACAAAATCTATACATGGCTATTCTTATTTTTTGACTGTTGTCGATGATTATAGTAGATTTACATGGATAATCCTTATGAAGCATAAATCTGAGGCTAGGCAAAAGTTAATTGATTTCACAAAATTAATAGAAACTCAACAtgattcaaaaatcaaaattataagaACTGACAATGGAGTTGAGTTTTCTATGCCTCAGTTTTACTCTTCAAAAGGCATTATTCACCAAACCACATGTGTTGAATCCCCTGAACATAATGGAAGGGTTGAACGCAAACACCAACATCTCTTAAATGTTGGTAGAGCCTTGTTGTTTCAAGCAAACCTACCTAAATCTTTTTGGTCTTTTGTTGTTCAACATGCCACCTATCTTATAAATAGACTTCCTACTACTGttttaaataacaaatctcCTTATGAAGTTTTACATAATACAATTCCTACTGTGGAACATTTAAAAGTGTTTGGTTCTATTGCATATGCTTCTACTTTACAAAATCATAGAACCAAGCTAGCACCTAGAAGTAGGAAATGTATTTTCTTAGGTTACAAGCAAGAACCTACAACACCTACACCAGACATAACAGAACCTACAACACCTACACTAGACATACCACCTTCTCATCCAACTTTAGAGAATGATTCCATTGATCAACCCACAAATTACATTCCctctgattttgttttgtttgatcaTACTATCCCTCTTGAACCCCCACCTATTGATGTCACAATTCCCAGATCCACTAGACAAAGAAATGCACCAAGTTATCTGTCAGAATATGTTTGTAATCACTCAAACACATCTCCAGCATCATTACATTCAGGTATATTGTATCCACTTTCTGATTACCATTCACTTGATAAGTTGTCACCAAAATTTCATGCATACACAGTTTCTCTCACACACACCACTGAGCCTAAAACTTACTTAGAAGCTTCAAAGTCTGAATGTTGGCAAAGGGCTATGAAAGATGAACTGGATGCTTTAGCTAAGACAGGTACTTGGAAAATTGTTGATTTTCCACCTCATGTAAAACCCATTGGGAGTAAGTGGGTTTACAAGGTAAAATATAAAGCTGATGGGACAGTTGAGAGACACAAGGCCAGACTTGTGGCCAAAGGATATAATCAAGTAGAAgAGGAGAATGTCTACAAGCTTGTTCCAAAGGGTATTACCACTTCTAAGCCTAATCAGGTGTGCAAATTACAAAAGAGCCTGTATAGTTTGAAACAAGCTAGTCGAAAGTGGTATGAGAAGCTGACTTCCCTTCTTTTACATGAAGGGTATAAACAACCCACCTCAGATTATTCCCTTTTCACCCTTCATTCTGATTCACATTTCACTGCACTACTTGTTTATGTGGATGACATCATCTTGGCTGGCACAAGCATGACTGAATTTGACAGGATTAAGTCTATTTTggacacaaattttaaaatcaaagatCTTGGtactttgaaatattttatggGTTTAGATGTTGCCCAATCAAGGGAGGGACTTATTATTTCCCAAAGAAAATATTGTCTGGATTTACTCAAAGATTCAGGGCTCTTAGGTTCAAAACCTTCCTCTACACCTTTAGATCCTGCAGTTAAACTTCATAATGATGCTGTTAAACTTTATGAGGACATGTCTTCATACAGAAGACTTATAGGGAGACTTTTATATCTCACCAACACAAGACCATATATCAGTTTTGCTGTTCAAAACCTCAGTCAGTTCCTACACAAACCAACCATAGTTCATTTCAATGCTGCCTGCAGAGTGATTAGATATCTCAAACATAATCCTGGAAGAGGTTTGCTATTTTCCAGACACTCAGATGCTCAGTTATTAGGATTTGCAGATGCTGACTGGGCTGGTTGTATAGAAACTAGAAGATCAACAAGTGGATACTGCTTCTTTCTTGGTTCATCTCTTGTATCTTGGAAGGCAAAGAAGCAACTAACTGTGTCCAGATCTtcttctgaagcagaatataGATCCTTGTCAACTGCAACTTGTGAACTGATATGGCTTCTATTCTTGATGAAAGATCTCAACATACAATGCAGCAAACAACCTATCATCTACTGTGATAGCCAAAGTGTCATGCATATTGCCTCAAATCCTGTTTTCCACGAACGTACAAAACACTTGGAGATAGACTGTCATCTTGTTAGAGAAAAGTTGAATGTTTTTATAAGCCATAACTCAGTTTCACTCcctcattcattcattcttcttcttcttcttcctccatttCCAACTACATCATCCATTTCAAGAATGAAGTATACAAAAATGGAGCAATTGTTAAGTCTTGTGATATGTACACTGTTATTACTAAAATCAGCTGAAGGGGTTGCTGTGCCAATCACTTATGTTCAAAGTGCAGTTGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTTGATAAGGGATCTGAAGGTGGCCTTGACAACTGGATTGTTCATTTTGAGGGAGGAGGATGGTGCAACAATGCCACTACTTGCCTGGACCGAGTTAGCACTCGTTTAGGATCATCAAAGAAAATGGATACGACACTTTCCTTTTCAGGATTTTTTAGCAGCGGCAAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCATCATTTACCGGTGATGTTGAAGCTGTCGATCCAAAAACCAATTTGCACTACAGAGGAGGAAGGATTTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAACGCAATTCTGTCTGGATGTTCCGCTGGAGGATTGACCTCTATTTTACAATGCGATCGCTTCAAAACTTTACTACCTGCAGCAGCTAAAGTTAAATGTGTCTCAGATGCTGGCTATTTTATCAATGTAAAGTCTGTTTCTGGATCACAGCACATTGAACAATTCTACAGTCAAGTTGTTCAAACTCAtGGCTCAGCAAAGAATTTGCCATCATCTTGCACTTCAAGACTCCCACCAGGGCTGtgttttttccCGGAAAATGTGGCCGCACAAATCAGGACTCCAATCTTTTTTGTAAATGCAGCCTATGATTCATGGCAGATTaagaacattttggcgcccgGTGTTGCTGATCCCCATGGCACCTGGAGGAACTGCAAACTTGATATAACCAAATGTTCATCTACTCAATTAACTACAATGCAAGGTTTTAGGGCAGATTTCTTAAAGGCAATTAGTGTGATTAGTAACTCTCCATCTAAAGGAGCGTTTATAGATGGTTGCTATTCCCACTGCCAAACTGGAATTCAAGAAACATGGATGAGAAATGACTCTCCAGTGCTGGCCAAGACAACAATAGCAAAGGCTGTAGGAGATTGGTATTATGAGAGAAGGAATTTTCATGAGATAGATGGTCCTTACCCTTCCAACCCTACTTGTCATAACCGTGTTTTTGAATAA 4650 0.366 MDLKKRNTKKYSFKEPDLSRLRELGALVPFPEDFQKRYGKLLNILNTNVEEGILNTLVQFYDPIYHCFTFVDYQLVPTLEEYSYWVGLPISERKYGLPPHLRPRTSNVNNATLEGGFEDTPSSSSTSTSASSSTGPTITQDQALQLISLLQNSFPSQDLATTASNQVCSNDFTGHTSVNQGKFPNLFHSCSLGSWILDSGASHHMCNFTQWFLSYKEITPIKVKLPNGNFVLAKHSGTIQFSPKFIITDVLCVPNFSVNLLSVSQLCKLAKYSIKFNGFQCFIHDQDTKMMIGSADVFNGLYYLKLADKEVHAHTVSATTPLITTLPERAIWHFRLGHISLNRMNLLHSQFPYIVVDNKGVCDICHLARQKKIPYSTSTNKACNPYEIMHFDIWGPLATKSIHGYSYFLTVVDDYSRFTWIILMKHKSEARQKLIDFTKLIETQHDSKIKIIRTDNGVEFSMPQFYSSKGIIHQTTCVESPEHNGRVERKHQHLLNVGRALLFQANLPKSFWSFVVQHATYLINRLPTTVLNNKSPYEVLHNTIPTVEHLKVFGSIAYASTLQNHRTKLAPRSRKCIFLGYKQEPTTPTPDITEPTTPTLDIPPSHPTLENDSIDQPTNYIPSDFVLFDHTIPLEPPPIDVTIPRSTRQRNAPSYLSEYVCNHSNTSPASLHSGILYPLSDYHSLDKLSPKFHAYTVSLTHTTEPKTYLEASKSECWQRAMKDELDALAKTGTWKIVDFPPHVKPIGSKWVYKVKYKADGTVERHKARLVAKGYNQVEEENVYKLVPKGITTSKPNQVCKLQKSLYSLKQASRKWYEKLTSLLLHEGYKQPTSDYSLFTLHSDSHFTALLVYVDDIILAGTSMTEFDRIKSILDTNFKIKDLGTLKYFMGLDVAQSREGLIISQRKYCLDLLKDSGLLGSKPSSTPLDPAVKLHNDAVKLYEDMSSYRRLIGRLLYLTNTRPYISFAVQNLSQFLHKPTIVHFNAACRVIRYLKHNPGRGLLFSRHSDAQLLGFADADWAGCIETRRSTSGYCFFLGSSLVSWKAKKQLTVSRSSSEAEYRSLSTATCELIWLLFLMKDLNIQCSKQPIIYCDSQSVMHIASNPVFHERTKHLEIDCHLVREKLNVFISHNSVSLPHSFILLLLLPPFPTTSSISRMKYTKMEQLLSLVICTLLLLKSAEGVAVPITYVQSAVAKGAVCLDGSPPAYHFDKGSEGGLDNWIVHFEGGGWCNNATTCLDRVSTRLGSSKKMDTTLSFSGFFSSGKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFKTLLPAAAKVKCVSDAGYFINVKSVSGSQHIEQFYSQVVQTHGSAKNLPSSCTSRLPPGLCFFPENVAAQIRTPIFFVNAAYDSWQIKNILAPGVADPHGTWRNCKLDITKCSSTQLTTMQGFRADFLKAISVISNSPSKGAFIDGCYSHCQTGIQETWMRNDSPVLAKTTIAKAVGDWYYERRNFHEIDGPYPSNPTCHNRVFE 1549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02751 1549 Pfam Integrase core domain 385 481 IPR001584 GO:0015074
Tsu04g02751 1549 PANTHER NOTUM-RELATED 1161 1548 IPR004963 GO:0016787
Tsu04g02751 1549 Pfam Pectinacetylesterase 1178 1528 IPR004963 GO:0016787
Tsu04g02751 1549 SUPERFAMILY Ribonuclease H-like 385 553 IPR012337 -
Tsu04g02751 1549 MobiDBLite consensus disorder prediction 103 136 - -
Tsu04g02751 1549 CDD RNase_HI_RT_Ty1 1013 1137 - -
Tsu04g02751 1549 Pfam GAG-pre-integrase domain 300 370 IPR025724 -
Tsu04g02751 1549 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 779 927 IPR013103 -
Tsu04g02751 1549 ProSiteProfiles Integrase catalytic domain profile. 381 544 IPR001584 GO:0015074
Tsu04g02751 1549 MobiDBLite consensus disorder prediction 98 136 - -
Tsu04g02751 1549 SUPERFAMILY DNA/RNA polymerases 732 1119 IPR043502 -
Tsu04g02751 1549 Gene3D - 377 570 IPR036397 GO:0003676
Tsu04g02751 1549 PANTHER PECTIN ACETYLESTERASE 1161 1548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02751 Tsu-Chr4 31783287 31797533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02751 1161 1548 Carbohydrate Esterase AT4G19420 56.738 5.69e-175 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02751 K19882 - gmx:100781246 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02751 04 31783287 31797533 Tsu05g01075 05 9437747 9442123 PCT