Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02750 atGGAGAGTTCAATTATCATTCAATGGTTAAACACTTTTCTACTATTTGCACTGCTGTTACTTAAGACACAAGGACAGTATGTTCCAATAACTCGGCTCGAAAGCGCGGTATCAAAAGGAGCTGTGTGTTTGGATGGAAGCCCTCCAGCTTATCATTTTGATGAAGGACATGAAGAAGGAGTTAAAAACTGGATTGTTCACATTGAGGGAGGTGGATGGTGTCACAATGTGACATATTGTCTTTACCGTAAGGACAGTCGATTAGGCTCGTCGACTCAAATGGAAGAGCAAACTTACTTTTCTGGATATTTAAGTGATAACCAACAATATAATCCAGATTTCTACAATTGGAATAGAGTCAAGGTTAGGTACTGTGATGGATCATCATTTACCGGTGATGTTGAAGAAGTTGATCCAGAAACAAATTTGCACTACAGAGGACAAAGAATTTTTAATGCAGTAATGGAAGAGTTACTAGCAAAAGGAATGGATCATGCTGAAAATGTTATTCTTTCTGGATGTTCTGCTGGAGGATTAACTGCTATATTACACTGTGATGGATTTAGAGAACTATTACCTAGTGGAACTAAAGTGAAATGTGTCTCAGATGCTGGTTATTTTGTTAATGTAAAGGATATTTCAGGAGATTATTATATTGAAGATTATTACAGTCAAGTTGTTGCAACACATggGTCAGAGAAGAATTTGCCTCAATCCTGCACTTCAAAACTCAGTCCAGGACTGTGCTTTTTTCCTCAATATATGGCATCAAGTATCCGAACACCACTCTTCATTGTAAATGCAGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGACGCTGATCCGAATGGCCAATGGAGTAGCTGCAAGACTAATCTAAACAACTGCTCACCTGAACAACTAAATATAATGCAagaCTATAGGACACAATTCTTGGAGGCATTGAGTCCTATAAGCAACTCTTCATCTAATGGAATGTTCATCGACTCTTGCTATGTTCACTGCCAAACAGAACCACAAGATACATGGTTTACAAGGGATTCTCCAATGGTTGACAATAAAACAGTTGCAAAGGCAGTAGGAGACTGGTTTTATGAAAGAGATCCTTCCCGTGAGATAGATTGCACTTACCCTTGCAACCCTACTTGTCAGAACCGTGTTTTGGATGTTGCAGCCTACCCAGGAATACACTAG 1206 0.3897 MESSIIIQWLNTFLLFALLLLKTQGQYVPITRLESAVSKGAVCLDGSPPAYHFDEGHEEGVKNWIVHIEGGGWCHNVTYCLYRKDSRLGSSTQMEEQTYFSGYLSDNQQYNPDFYNWNRVKVRYCDGSSFTGDVEEVDPETNLHYRGQRIFNAVMEELLAKGMDHAENVILSGCSAGGLTAILHCDGFRELLPSGTKVKCVSDAGYFVNVKDISGDYYIEDYYSQVVATHGSEKNLPQSCTSKLSPGLCFFPQYMASSIRTPLFIVNAAYDSWQIKNILAPGDADPNGQWSSCKTNLNNCSPEQLNIMQDYRTQFLEALSPISNSSSNGMFIDSCYVHCQTEPQDTWFTRDSPMVDNKTVAKAVGDWFYERDPSREIDCTYPCNPTCQNRVLDVAAYPGIH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02750 401 Pfam Pectinacetylesterase 22 372 IPR004963 GO:0016787
Tsu04g02750 401 PANTHER PECTIN ACETYLESTERASE 6 394 - -
Tsu04g02750 401 PANTHER NOTUM-RELATED 6 394 IPR004963 GO:0016787
Tsu04g02750 401 SUPERFAMILY alpha/beta-Hydrolases 139 273 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02750 Tsu-Chr4 31773062 31776505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02750 8 400 Carbohydrate Esterase AT4G19420 56.776 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02750 K19882 - gmx:100780707 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02750 04 31773062 31776505 Tsu04g02750 04 31773062 31776505 ECH
Tsu05g01075 05 9437747 9442123 Tsu04g02750 04 31773062 31776505 PCT