Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02727 ATGGTAGCAGGAAATGGTGATATATGGAAAGCACATACGGCTATGGCAATTGTGCAGTTATTCACCGGTGGTTATCATGTTATTACAAAATTGGCTCTTAATGTTGGAGTCAACCaaattgttttttgtgtttttcgtGATCTTCTTGCTCTCTCTATTCTTGCTCCTATCGCTTTTTTTCGTGAAAGACGTACACGGCCACCCCTAACCAAACGCTTTGTGACGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAATcatcttttatttcttattgGCTTGAGCTACACTACTCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCAGTCTTTACATTTATTTTGGCTATAATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTCTGGCCAAGGTTGGAGGAATTATTGTCTGTGTCTTGGGTGCCTTGGTGATGGTTTTGTTCCGTGGTCCAGCACTGGTAGGATCTTCAGAAATGGACATTATATCACACAGTGAAATAAGTGCCAGAGGTCAACCAGAGCCTTCTGGATGGTTAGTTAGTGGTTTAATGGAACTTGGATTAGACCATTTTCATGTTGGGGTTTTGTGCTTCATAGGAAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCATTATTGAAAAAGTATCCTGCAAACCTATCTGTCACAGCGTATTCATACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTTGTGACTGATGAGACAACTGATTGGAGGTTAACACAGTCTGAAACATTTGCCGTTTTATATGCTGGGATTATTGCATCTGCCCTTAATTATGGAATCATTACATGGAGCAACAAGATCTTGGGCCCAGCCATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCTGCGGCTCTCCTGTCTAGAATTTTTATTGGAAGTCCAATTTACATGGGAAGTGTCTTAGGTGGATCTCTGATCATTACTGGTCTGTATGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCTGGAGTTATTTCTCATCATGTCTCTAAATGGGAATCACTTCGCAAGACTTCGTTTCCTAGAATCACTAATATTTTCTCAGGCTCCTCAAAGCCTTCGGATTGA 1143 0.4042 MVAGNGDIWKAHTAMAIVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAFFRERRTRPPLTKRFVTSFFFLGLTGIFGNHLLFLIGLSYTTPTYAAAIQPATPVFTFILAIMMGTERVNLLRYEGLAKVGGIIVCVLGALVMVLFRGPALVGSSEMDIISHSEISARGQPEPSGWLVSGLMELGLDHFHVGVLCFIGNCMCMATFLSIQAPLLKKYPANLSVTAYSYFFGALLMVTTSYFVTDETTDWRLTQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVISHHVSKWESLRKTSFPRITNIFSGSSKPSD 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02727 380 PANTHER WAT1-RELATED PROTEIN 10 360 IPR030184 GO:0016021|GO:0022857
Tsu04g02727 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 341 - -
Tsu04g02727 380 Pfam EamA-like transporter family 199 336 IPR000620 GO:0016020|GO:0016021
Tsu04g02727 380 Pfam EamA-like transporter family 14 152 IPR000620 GO:0016020|GO:0016021
Tsu04g02727 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Tsu04g02727 380 PANTHER WAT1-RELATED PROTEIN 10 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02727 Tsu-Chr4 31225972 31231268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02727 94 344 Nodulin-like Gene Family AT5G45370 66.932 1.40e-122 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02727 - - gmx:100809051 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02727 04 31225972 31231268 Tsu04g02727 04 31225972 31231268 ECH
Tsu05g01001 05 8654892 8674809 Tsu04g02727 04 31225972 31231268 PCT