Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02724 ATGATCATTGATATGCCACCATCCATGGCTGAAAATACTAGGAACAACTATGCTGCTGTTAACAATGCTGATGATTATGATAGTGATAGCTCAAATTTGTTACCACGCACACCGTCAACTCTTTCTATGTCTGTTCCAGCTGAACTCGCTGGAGCTATACCCTTGATCGACAAATTTCAGGTGGATGGATTTTTAAAACTCATGCATAAACAAATTCAATCTTCTGGAAAACGTGGATTTTTTTCTAAAAGATCTTCAGATCCCCAAGCTCGTGAAAAATTTACATTTGAGGACATGCTGTCTTTTCAAAAGGATCCAATACCAACTGCATTGCTTAAGATTAATGGTGATTTAGTAAGTCGGGCGACAAAATTATTCCAGATAATTTTGAAGTATACTGGAGTTGATTCATCTGATTGTGCAACTCCATTAAGCTTAGATGAACGAGTTGAGCTCGTTGGGAAACTATACAAGCAAAGTTTGAAACGTGCAGAACTCCGAGACGAGCTTTTTGTTCAGAtatcaaaacaaacaagaaaTAACCCTGACAGGCAATACTTGTTCAAAGCATGGGAGCTTATGTATGTATGTGCATCCTCCATGTCTCCTAGCAAAGACATTGCGGTTTATCTGTCAGAATACATTCAGAACATAGCACATGGTGTAGCAACTGATTCTGAGATCCAAACCCTTGCACTAAATACGGTGAATGCTTTGAAGCGTTCTGTCAAGGCTGGTCCTAGACATATAATACCTGGGCGAGAGGAGATTGAAGCTTTGTTGACTGGGAGAAAGCTTACAAGTATAGTGTTCTTCTTAGATGAAACTTTCGAAGAAATTACATATGACATGTCAACAACAGTTGCCGACGCTGTTGAGGAACTTGCAGGGCTCATTAAACTGTCGGTTTACTCTAGCTTTAGTTTGTTTGAATATCGTAAAGTTGTTACAAGTTCCAAATCATCTGATCCTGGTAATGAGGAGTACATTGGGATAGATGATAACAAATATATTGGGGATCTCCTGGCGGAGTTTAAGGCAGCAAAAGATCGAAGTAAGGGAGAAATCTTGCACTGTAAACTGGTATTCAAGAAAAAGCTATTTCGTGAGTCAGATGAAGCCGTGACGGATCCAATGTTTCTGCAGTTGTCCTATGTACAATTGCAACATGATTATATTTTGGGTAATTACCCTGTTGGAAAAGATGATGCTGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATCTGTTAGCACACCTGAAACATGCACTAACTGGAATTCACTTCTGGAGCGATTCCTTCCTAGACAAATTTCAATGACACGAGCAAAACGTGAATGGGAGTTTGATATTATATCTCGATATCATTCATTGGAGCATCTGACAAAAGATGATGCAAGACAACAATTTCTGCGTATATTGAGAGCACTTCCTTATGGGTATTCTGTTTTCTTCAACGTTCGCAAAATTGATGATCCTATTGGACTCTTGCCTGGACGAATAATAATTGGAATCAATAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCTAAGGAATATTTGCACTCGGCTGAGTTGAGAGATATAATGCAATTCGGAAGCAGCAACACTGCAGTCTTTTTTAAAATGCGAGTAGCAGGTGTTCTTCACATATTCCAGTTTGAAACTAAACAGGGGGAAGAAATTTGCGTAGCTCTACAGACACATATAAATGATGTAATGTTGCGCCGTTATTCGAAAGCACGGTCTTCTAGTGGCGGTAGTTCTTTGAATGGAGATGTTTCTACTAATTCAAAGCCTCCTAATTTAGAATCATATGAGAAACGCATTCAAGATTTATCAAAACTTGTTGAAGAATCTCAAAGAAATGCTGATCAATTGAATAAAGAGTTGCGTGAGAAGCAAGAACAGGAAGAAAAAATGCAAGAACAATTGGAGGGTTTGAAGGAATCCTTAAAAGCTAACGAGCAAAATCTTAAGGCAGTTACAAGTGACTGCGAAAGGCTTAGGTCATTATGCATTAAAAAAGATCAGGCGCTACAGGTTGTAGAGAACCATTCCAAAAAGGATCTTGTTGAAACAAATAACCAAGTGCTACAAAAGCTTAAATATGAGCTAAAAAATTGTAAAGATGAACTGCTTTCAGCCGAACAAACTGTCAAAACCTTGACAagtgaaaaaatgattttggaaCAGAAGCTGTCTGTGCTTGAGAAGAGGAACGTTGAAGAGAGTAGTTCTCTTCAACGGAAATTTGAGCAAGAGCGCAAAGCTGTGAAGTCTCAAGTGTACGACCTTGAAAGAAAGCTAGAAGGGTATAGACAAGAATTAATGACTGCTAAGTCTATTATTTCAGTCAAGGACACTGAGTTGGCTGCATTGCAAAATAATTTCAAGGAATTGGAAGAATTGCGAGAAATGAAAGAGgaCATTGATAGAAAGAATGAACAGACAGCTGCCATATTGAAGATGCAAGGAGCTCAACTAGCCGAAATGGAAGCCCTTTATAAGGAAGAACAGGTTTTAAGGAAGcgttattttaatgtaatagaAGacATGAAAGGCAAGATTCGAGTTTATTGTCGGCTAAGACCTCTTAGTGAAAAAGAGATTGTTGAGAAGGAAAGAGAAGCTGTTACTGCAGCTGATGAGTTTACTGTTGAGTTTCTATGGAAGGATGATAAGCCAAAGCAGTACATATATGATCGTGTTTTTGGCAGTGATGCAACTCAAGAAAGTGTATTTGAGGATACCAGGTATTTGGTGCAATCTGCTGTAGATGGTTTTAATGTGTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACGTTTACAATCTATGGATCTGAAGATAATCCCGGGCTTACCCCTCGTGCAATTGGTGAACTTTTTAGAATTTTACGGAGAGATGGTAAAAAGTATTCCTTTTCCTTGAAGGCATACATGGTGGAATTATATCAAGATACCCTAATAGATCTTCTGTTACCTAGGAATGCAAAGCATTCAAGATTAGATATCAAGAAGGATTCAACGGGAATGGTTGTTGTGGAAAATGTGACGGTGATGACAATTTCCACAATTGAAGAATTGAATAATATAATACAAAAGGGATCAGAACGTCGACATATATCAGGGACACAAATGAATGAAGAAAGTTCAAGATCTCATCTCATTCTTTCAATAGTAATTGAAAGCACAAACCTTCAAAGCCAATCAGTTGCACGGGGAAAGCTGAGTTTTGTTGATCTTGCCGGTTCAGAAAGAGTGAAAAAGTCTGGTTCTATGGGTAGTCAGCTGAAGGAAGCACAGAGTATTAACAAATCATTATCAGCACTTGGAGATGTTATAAGTTCTTTGTCTTCTGGCGGTCAACACACACCTTATAGGAATCACAAGTTAACAATGTTGATGAGTGATTCACTCGGTGGTAATGCCAAAACTCTCATGTTTGTCAATGTTTCTCCAATAGAATCAAGCTTGGATGAGACTCATAACTCTCTCACGTATGCTTCAAGAGTGAGATCAATTGTGAATGACCCTAACAAAAATGTTAGTTCAAAAGAAGTAGCGCGATTAAAGAAGTTGGTTGCATATTGGAAACAACAAGCTGGCAGAGGAATTGAGTATGAAGATTTAGAAGAAATTCAAGAAGAACGATCACCTAAAGATAGACCAGATAGTCATGGTAGCTCTAGATCTAGTCTAGGCGGTAAATAG 3726 0.38 MIIDMPPSMAENTRNNYAAVNNADDYDSDSSNLLPRTPSTLSMSVPAELAGAIPLIDKFQVDGFLKLMHKQIQSSGKRGFFSKRSSDPQAREKFTFEDMLSFQKDPIPTALLKINGDLVSRATKLFQIILKYTGVDSSDCATPLSLDERVELVGKLYKQSLKRAELRDELFVQISKQTRNNPDRQYLFKAWELMYVCASSMSPSKDIAVYLSEYIQNIAHGVATDSEIQTLALNTVNALKRSVKAGPRHIIPGREEIEALLTGRKLTSIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSVYSSFSLFEYRKVVTSSKSSDPGNEEYIGIDDNKYIGDLLAEFKAAKDRSKGEILHCKLVFKKKLFRESDEAVTDPMFLQLSYVQLQHDYILGNYPVGKDDAAQLSALQILAEIGSVSTPETCTNWNSLLERFLPRQISMTRAKREWEFDIISRYHSLEHLTKDDARQQFLRILRALPYGYSVFFNVRKIDDPIGLLPGRIIIGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSSSGGSSLNGDVSTNSKPPNLESYEKRIQDLSKLVEESQRNADQLNKELREKQEQEEKMQEQLEGLKESLKANEQNLKAVTSDCERLRSLCIKKDQALQVVENHSKKDLVETNNQVLQKLKYELKNCKDELLSAEQTVKTLTSEKMILEQKLSVLEKRNVEESSSLQRKFEQERKAVKSQVYDLERKLEGYRQELMTAKSIISVKDTELAALQNNFKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMEALYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLSEKEIVEKEREAVTAADEFTVEFLWKDDKPKQYIYDRVFGSDATQESVFEDTRYLVQSAVDGFNVCIFAYGQTGSGKTFTIYGSEDNPGLTPRAIGELFRILRRDGKKYSFSLKAYMVELYQDTLIDLLLPRNAKHSRLDIKKDSTGMVVVENVTVMTISTIEELNNIIQKGSERRHISGTQMNEESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSMGSQLKEAQSINKSLSALGDVISSLSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLTYASRVRSIVNDPNKNVSSKEVARLKKLVAYWKQQAGRGIEYEDLEEIQEERSPKDRPDSHGSSRSSLGGK 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02724 1241 SMART MyTH4_1 102 261 IPR000857 GO:0005856
Tsu04g02724 1241 Pfam Kinesin motor domain 864 1179 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02724 1241 Gene3D MyTH4 domain 80 263 IPR038185 -
Tsu04g02724 1241 ProSiteProfiles Kinesin motor domain profile. 858 1179 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02724 1241 SUPERFAMILY Second domain of FERM 364 481 IPR035963 -
Tsu04g02724 1241 Gene3D - 265 369 - -
Tsu04g02724 1241 ProSiteProfiles MyTH4 domain profile. 102 261 IPR000857 GO:0005856
Tsu04g02724 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 858 1205 IPR027417 -
Tsu04g02724 1241 Gene3D Kinesin motor domain 800 1180 IPR036961 -
Tsu04g02724 1241 SUPERFAMILY PH domain-like 486 574 - -
Tsu04g02724 1241 Coils Coil 605 674 - -
Tsu04g02724 1241 Gene3D - 1182 1230 - -
Tsu04g02724 1241 CDD KISc_C_terminal 856 1181 - -
Tsu04g02724 1241 SMART B41_5 262 486 IPR019749 -
Tsu04g02724 1241 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 585 1229 - -
Tsu04g02724 1241 MobiDBLite consensus disorder prediction 1212 1241 - -
Tsu04g02724 1241 Coils Coil 694 742 - -
Tsu04g02724 1241 PANTHER KINESIN-RELATED 585 1229 IPR027640 GO:0003777|GO:0007018
Tsu04g02724 1241 MobiDBLite consensus disorder prediction 1212 1232 - -
Tsu04g02724 1241 SUPERFAMILY Prismane protein-like 801 862 IPR011254 GO:0003824|GO:0016491
Tsu04g02724 1241 Pfam MyTH4 domain 155 259 IPR000857 GO:0005856
Tsu04g02724 1241 Gene3D - 378 479 IPR014352 -
Tsu04g02724 1241 SMART kinesin_4 856 1187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02724 1241 Pfam FERM central domain 372 486 IPR019748 -
Tsu04g02724 1241 ProSitePatterns Kinesin motor domain signature. 1079 1090 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu04g02724 1241 ProSiteProfiles FERM domain profile. 266 580 IPR000299 GO:0005856
Tsu04g02724 1241 CDD FERM_C_KCBP 484 584 - -
Tsu04g02724 1241 PRINTS Kinesin heavy chain signature 930 951 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02724 1241 PRINTS Kinesin heavy chain signature 1049 1066 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02724 1241 PRINTS Kinesin heavy chain signature 1080 1098 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02724 1241 PRINTS Kinesin heavy chain signature 1129 1150 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02724 1241 CDD FERM_B-lobe 381 479 IPR019748 -
Tsu04g02724 1241 Coils Coil 786 823 - -
Tsu04g02724 1241 Coils Coil 758 778 - -
Tsu04g02724 1241 MobiDBLite consensus disorder prediction 584 606 - -
Tsu04g02724 1241 Gene3D - 484 592 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02724 Tsu-Chr4 31179962 31187938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02724 41 1230 Calmodulin-binding Proteins AT5G65930 72.479 0.0 1776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02724 - - gmx:100807481 1946.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02724 04 31179962 31187938 Tsu04g02724 04 31179962 31187938 ECH
Tsu05g00986 05 8545646 8551748 Tsu04g02724 04 31179962 31187938 PCT