Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02721 ATGTCTTCTTCTGGTTATTCTATGAAcagtgttttgttttctttgtttttgtttctgctTGTTGCAAAAGTTAGCTTTTGCTTTTCTACCAAGGTTTATGTAGTTTACATGGGAAGCAAAAGTTGGGAAAACCCAGATGATATTTTGAAGGAAAATCATCAAATACTTGCTTCTGTTCATAGTGGAAGCATTGAAGAAGCACAAGCTTCTCATGTTTATAGCTATAAACATGGTTTCAGAGGCTTTGCAGCTAAGCTCAGTGATGAACAGGCTTCCCAAATTTCTAAAATGGAAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAAAGCTGCACACAACTCATTCATGGGATTTCATGGGAGTTTTGGATGACCAAACCATGGAAACACTTGGCTACTCTATTACAAACCAAGAAAATATCATCATTGGTTTCATTGATACTGGAATTTGGCCAGAATCTCCAAGTTTCAGTGACACTGACATGCCTGAAGTCCCACTAGGGTGGAAGGGTCGATGTCAATCAGGAGAAGCATTCAATGCCTCAACTTGCAACAGGAAAGTGATAGGAGCAAGATACTATTTGAGTGGATATGAAGCAGAAGAAGAGTCACATGCAAAAGTGTCATTCAAATCAGCTAGGGACAGTGCCGGTCATGGTAGCCATACGGCTTCTATAGCGGCAGGGAGATATGTACAGAACATGAATTATAAAGGACTAGCAAGTGGAGGTGCAAGAGGAGGTGCACCTATGGCTAGGATTGCTGTATACAAATCATGTTGGGATTCAGGTTGCTATGATGTGGACTTGTTAGCGGCATTTGATGATGCTATAAGAGATGGTGTTCACATTTTGTCTCTATCACTTGGTGGTCAATCACCACAAGGAGATTATTTCAATGATGCTATATCTATAGGGTCGTTTCATGCTGCCAACCGTGGAGTGCTTGTTGTTTCGTCTGCTGGAAATGAAGGAAATCCTGGTTCTGCTACTAACCTTGCACCATGGATGCTTACCGTTGCTGCTAGCTCAACTGATAGGGATTTTACTTCTGATATCATATTAGGAAATGGTGCTAAAATCACGGGTGAAAGTCTAAGTCTCTTTGAAATGAATGCATCCTCAAGGATAATTTCAGCTTCTCAAGCATTTGCAGGATACTTCACTCCTTATCAATCCAGTTATTGTTTAGAGAGTTCTTTGAATAAAACAAAGACCAAAGGGAAGATTCTAGTTTGTAGACATGTAGAGAGGTCAACAGAATCAAAAGTGAAAAAGAGCAAGATAGTGAAAGAAGCAGGTGGAGTTGGCATGATACTTATTGATGAGACAGATCAAGATGTTGCCGTCCCATTTGTGATCCCTTCAGCTATTGTTGGAAAGAAAAAAGGAGAAACGATTCTATCGTATATCAAGACTACACGTAAACCTATGTCAAGGATATTAGCAGCAAAGACAGTAATAGGAGCTCGACCTGCACCACGTGTAGCTGCATTTTCTTCCAAAGGTCCCAATGCTTTAAACCCTGAAATTTTGAAGCCTGATGTGACAGCTCCAGGACTAAATATTCTAGCAGCATGGTCTCCAGCAGCTGGAAACATGTTCAACATTCTCTCAGGAACTTCTATGGCGTGTCCTCATGTAACTGGAATTGCAACTTTGGTCAAAGCTGTTCATCCTTCATGGTCTCCATCTGCTATCAAATCTGCCATCATGACAACTGCTACAATCCTAGATAAACGCCACAGACCGATCATCGTAGATCCAGAACAAACAAGGGCTAATGCATTTGATTATGGATCAGGATTTTTGAACCCTTTAAGAGTTCTTAACCCTGGTCTTATCTATGATTCTGAGCCAACAGATTTCATTACATTCCTATGTTCACTTGGTTATGATCAAAGATCACTTCATCTTGTTACTAGAGACAACGAAACATGCAAAAGCAAATTCACCACTGCATCAAACCTCAACTATCCATCTATTGCAGTTGCAAATCTCAAAGACAACTTTTCAGTTACAAGGATTGTGACAAATGTTGGAAAAGCAACAAGTATATATAAATCTGTAGTTTCTCCACCACCTGGTGTTAATGTCACTGTTACGCCGAATCGGTTAGTGTTCACAAGAATTGGACAGAAAATAAAGTTCAGTGTGAATTTCAAAGTAAGTTCTTCTCCTTCAAAAGGATACAAATTTGGATTCTTGTCATGGACAAATAGAAGGTTACAAGTTACTAGTCCTTTGGTTGTAAAGGTTGGTTAG 2265 0.3925 MSSSGYSMNSVLFSLFLFLLVAKVSFCFSTKVYVVYMGSKSWENPDDILKENHQILASVHSGSIEEAQASHVYSYKHGFRGFAAKLSDEQASQISKMEGVVSVFPNSKRKLHTTHSWDFMGVLDDQTMETLGYSITNQENIIIGFIDTGIWPESPSFSDTDMPEVPLGWKGRCQSGEAFNASTCNRKVIGARYYLSGYEAEEESHAKVSFKSARDSAGHGSHTASIAAGRYVQNMNYKGLASGGARGGAPMARIAVYKSCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGGQSPQGDYFNDAISIGSFHAANRGVLVVSSAGNEGNPGSATNLAPWMLTVAASSTDRDFTSDIILGNGAKITGESLSLFEMNASSRIISASQAFAGYFTPYQSSYCLESSLNKTKTKGKILVCRHVERSTESKVKKSKIVKEAGGVGMILIDETDQDVAVPFVIPSAIVGKKKGETILSYIKTTRKPMSRILAAKTVIGARPAPRVAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKRHRPIIVDPEQTRANAFDYGSGFLNPLRVLNPGLIYDSEPTDFITFLCSLGYDQRSLHLVTRDNETCKSKFTTASNLNYPSIAVANLKDNFSVTRIVTNVGKATSIYKSVVSPPPGVNVTVTPNRLVFTRIGQKIKFSVNFKVSSSPSKGYKFGFLSWTNRRLQVTSPLVVKVG 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02721 754 Gene3D - 346 488 - -
Tsu04g02721 754 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 752 - -
Tsu04g02721 754 Pfam Subtilase family 139 578 IPR000209 GO:0006508|GO:0008236
Tsu04g02721 754 Pfam PA domain 384 467 IPR003137 -
Tsu04g02721 754 Gene3D Peptidase S8/S53 domain 140 623 IPR036852 GO:0004252|GO:0006508
Tsu04g02721 754 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Tsu04g02721 754 CDD Peptidases_S8_3 110 576 IPR034197 -
Tsu04g02721 754 ProSiteProfiles Serine proteases, subtilase domain profile. 116 610 - -
Tsu04g02721 754 Pfam Fibronectin type-III domain 656 751 IPR041469 -
Tsu04g02721 754 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 112 IPR037045 -
Tsu04g02721 754 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Tsu04g02721 754 Gene3D - 627 753 - -
Tsu04g02721 754 CDD PA_subtilisin_like 352 481 - -
Tsu04g02721 754 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 752 IPR045051 -
Tsu04g02721 754 SUPERFAMILY Subtilisin-like 111 614 IPR036852 GO:0004252|GO:0006508
Tsu04g02721 754 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Tsu04g02721 754 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Tsu04g02721 754 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02721 Tsu-Chr4 31126561 31132051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02721 33 753 Subtilisin-like Serine Gene Family AT2G04160 43.426 0.0 565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02721 04 31126561 31132051 Tsu04g02721 04 31126561 31132051 ECH
Tsu05g00981 05 8513698 8520222 Tsu04g02721 04 31126561 31132051 PCT