Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02716 ATGAACCTTTCTACTGATTcagaaccaccaccaccaccagatTCCGCCACCGTCAACGGCACATCCACATCAGACCAAAATCCACAACCACCATCAGAACTCGAATTCCCAATATCTTGGCCACAAGACGGAAAGTTAACCATAGAATGGATCCAAAATCTAACACTCTGTTTCGATTGGTCTTCCAAAAACCTACCTCCTTCCGAATTCCCTTCCGTTCTTCCTGTCCATGTCTTCGATTCTCTCATTCTCATCGCTTCCAAGATGCTTCACAAGGAACCTAATTGCGTTCCTATACAACCTTTTCGTCCTGATCCTGATTCTGAATCTTCTTCTTCCGCTGCatctgttgttgttgttggtgatgTTCATGGACAATTGCATGATCTCCTTTTTCTTCTACGAGATGCTGGTTATCCTTCAAAAGATCGAATCTTTGTTTTCAATGGTGATTATGTTGATCGTGGAGCTTGGGGACTCGAAACTTTCTTGCTCTTGTTGGCTTggaagGTATTCATGCCAgaaaacatatatttattaaGAGGGAATCATGAATCGAAATATTGCACTTCTGTTTATGGTTTTGAAAAAGAAGTTATGGTAAAGTATAGTGACAAAGGCAAACACGTATACCGGAAATGTTTAGGATGCTTTGAAGGTCTACCTTTGGCTTCTATTATAGCAGGGTGTGTATACACAGCTCATGGAGGACTTTTCCGTAGTGTAACTGTGATGCCTTCAAAGAGATTAAAAGGAAAGAAGAATCGTAAGATTAATGTTACTACCGACAGCAAAAATATATCGCTCGGTTCCTTGGAAGAGTTGTCCAAGGCTCGACGTTCAGTGCTTGATCCTCCCTGGGAAGGACAAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCTTCAAAAACGCCTGGTCTTTCTCCAAACAAAGAGAGAGGCATTGGCTTGGTTTGGGGTCCTGATGTTACTGAAGCATTTTTGAAGAAGTACCAATTTAAGTTGATCATCAGGTCACATGAAGGTCCTGATGCTAGGGAGAAAAGGGATGGTTTTGAGGGAATGGATGAAGGTTACACTATTGATCATATTGTGGAATCTGGAAAGCTGGTCACCGTGTTTAGTGCTCCAGATTACCCACAATTTCAGGCAACAGAGGAGAGGTATAACAACAAAGGTGCATATGTTGTCCTTGAGCCCCCGAATTTTGACAATCCTATATTTCATGGATTTTCAGCTGTTACTCCAAGGCCAAAGGCGAATCCTTATTATGATTTTGAGGATGTGTTAGACTCCGACGAAGAATTGGACTTGGCTTCCATGGTAACTACCTGA 1338 0.3999 MNLSTDSEPPPPPDSATVNGTSTSDQNPQPPSELEFPISWPQDGKLTIEWIQNLTLCFDWSSKNLPPSEFPSVLPVHVFDSLILIASKMLHKEPNCVPIQPFRPDPDSESSSSAASVVVVGDVHGQLHDLLFLLRDAGYPSKDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPENIYLLRGNHESKYCTSVYGFEKEVMVKYSDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVMPSKRLKGKKNRKINVTTDSKNISLGSLEELSKARRSVLDPPWEGQNLIPGDVLWSDPSKTPGLSPNKERGIGLVWGPDVTEAFLKKYQFKLIIRSHEGPDAREKRDGFEGMDEGYTIDHIVESGKLVTVFSAPDYPQFQATEERYNNKGAYVVLEPPNFDNPIFHGFSAVTPRPKANPYYDFEDVLDSDEELDLASMVTT 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02716 445 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 21 442 - -
Tsu04g02716 445 ProSitePatterns Serine/threonine specific protein phosphatases signature. 180 185 IPR006186 GO:0016787
Tsu04g02716 445 CDD MPP_PP7 40 426 IPR041754 -
Tsu04g02716 445 MobiDBLite consensus disorder prediction 1 16 - -
Tsu04g02716 445 Pfam Calcineurin-like phosphoesterase 116 344 IPR004843 GO:0016787
Tsu04g02716 445 MobiDBLite consensus disorder prediction 1 38 - -
Tsu04g02716 445 MobiDBLite consensus disorder prediction 17 33 - -
Tsu04g02716 445 Gene3D - 71 437 IPR029052 -
Tsu04g02716 445 PRINTS Serine/threonine phosphatase family signature 116 143 IPR006186 GO:0016787
Tsu04g02716 445 PRINTS Serine/threonine phosphatase family signature 146 173 IPR006186 GO:0016787
Tsu04g02716 445 PRINTS Serine/threonine phosphatase family signature 179 203 IPR006186 GO:0016787
Tsu04g02716 445 PRINTS Serine/threonine phosphatase family signature 216 242 IPR006186 GO:0016787
Tsu04g02716 445 PRINTS Serine/threonine phosphatase family signature 276 303 IPR006186 GO:0016787
Tsu04g02716 445 PRINTS Serine/threonine phosphatase family signature 370 386 IPR006186 GO:0016787
Tsu04g02716 445 SUPERFAMILY Metallo-dependent phosphatases 71 417 IPR029052 -
Tsu04g02716 445 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 21 442 - -
Tsu04g02716 445 SMART pp2a_7 74 419 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02716 Tsu-Chr4 30957320 30962955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02716 30 336 Calmodulin-binding Proteins AT5G63870 67.857 3.00e-153 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02716 K04460 - gmx:100802851 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02716 04 30957320 30962955 Tsu04g02716 04 30957320 30962955 ECH