Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02702 ATGTTGAACCAAAATTCATCGAAAAACactaatgaaaacaaaaacccCACTTCTGATCGCTCATTGAATGCATCTCTAAAATCCGTCACTCCTCCTTCTACTTTACCCTCTCCCACAAATCTTGATGTTGAAATTGCCAATTCAACGTCATCAGGTGTTTTGACACCACCCTTAGCAGCGGCACAAAGAAACAATGTGATTTTTCCAACTTGCATAGGCCTGCATGAGGCAACAACTTTGCAACTTAACACAATGTCCCAGTTTTCATCTCTGCTAACCGAGGGGAAAAAATTTCAGGCAGCAATTATCAAAGTCCATGAGGGAGAGGATGTTgctgagaaaataaaaatatttgctAAACAAAATGAATTTGTTTGGATAGCTGGAGCAATAGGCAGTTTATATGAAGCTGAAATTGGACAAGAgcaaaaagatttaattttgcAGGGAGATTATGATATTATTAATTTGGGAGGTTTATTCACTGCTCCTAAGAATGGTAACCCTATGACCGGCCAACTATCTATTACAATTGCTGCTGCAGGCATTGGTAGAGTTTATGGAGGAGCTGTTCTTGGACCGTTAATTGCTCAATCAGTTGTTCAGATAATAACTGCTTTCATTTGGAATTCGGTTGAAGATGGCAGTGAAGAACAAGACAATGATATTTAA 672 0.3586 MLNQNSSKNTNENKNPTSDRSLNASLKSVTPPSTLPSPTNLDVEIANSTSSGVLTPPLAAAQRNNVIFPTCIGLHEATTLQLNTMSQFSSLLTEGKKFQAAIIKVHEGEDVAEKIKIFAKQNEFVWIAGAIGSLYEAEIGQEQKDLILQGDYDIINLGGLFTAPKNGNPMTGQLSITIAAAGIGRVYGGAVLGPLIAQSVVQIITAFIWNSVEDGSEEQDNDI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02702 223 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 210 - -
Tsu04g02702 223 ProSiteProfiles PPC domain profile profile. 95 223 IPR005175 -
Tsu04g02702 223 CDD DUF296 102 207 IPR005175 -
Tsu04g02702 223 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 77 211 IPR039605 GO:0003680
Tsu04g02702 223 Gene3D - 99 216 - -
Tsu04g02702 223 MobiDBLite consensus disorder prediction 1 39 - -
Tsu04g02702 223 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 206 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02702 86 204 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 31.707 4.63e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02702 - - twl:120008499 64.3142