Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02676 ATGAAACttttcttcctcttcatcttcctcatcctcTCGCTTCTCAATCAACACTGCTACATCATCAACACCGCCTTTTCTCGCTCACCTACATCACGTTccattctctctcttcctcctccTAAGGCAGCAACTACAGCACTGATTGCCGCACTAGATGGAACCATGTATTTGGTGGCCAGCCAGGAGAATGGTTCCGTGAGGGTAATATGGTCATTCTCTACAGGATCACCAATCTACAGTTCGTATCAAGCTCCAATTAATAAGGAGCgtggtaaaaaaaatacatcttcaGCACCAACCAGCGGGTTCGTGGAGTGTGGGGATGATTGGTCTTTGTACATGCACGACAAGATCCTCGGTAAAATGAGATTGTCAGAATCTATTGCAGAATTTGTACATCGTGCACCTATCATTTCAGATGACGGAACTGCTATATTTGGATACAAAGAAGACAGTCTGTTCGAAGTTGACGCTAAAACTGGGTCGATCATTCAAATTCACGCCAAATCTGATCCTGGTAACGCTTCTGCACCTTTGAGAGATGACAGGCTAAGCGCTAAAAATATCATCAGTGCAGATAATAAGGATCTTGTTGATCCTGTGAAGCTAAATTCATCACAGCCACTGCTCATGCTTTTTAGGAAAGATTATACTCTGAAGTCTGTTAACACCAGCTCGAAAATAGTGTTGTGGAATTTGACAGTAACTGAATTTGAAGCTGTATTATTGTGCCAACATACTACAGTTGATGTAGAGGATGAAATTCCTTCTGTCAGTGGCCTCAATTTTGCAATGCCTTACCCATGTCAAGAGATGCAAAACGTCTTTCGCGTGAAAAAGAATTTTCTGTTAGAATCTTTAATCACTGAAAGTTTACTTGGGCCTTTTCATGAAAATGATATACTCTCAATGTCTTCCTTTGATCCAATGATTCCATTGCAACCCAGTGTTGATAGATTTTTTGATGGTCACGATGGTAATATCACATTTCTTCCTACGCCTCTGCCATATTCTATGCCTTATCTGCAACAAAACAATGATACGGCATATAAACTCCCTCAGCCTCTCCTTGAGATTACTTCACCAGGTCATGTTTATTTGAACAAGAAGAGTGGATGGTCAACTCCATTACCCCGTATATTGTTTACGGTCTTTCTTCTGGTGTTGGGCTTTTCACTCATCTGCTTTCTTCTGGTGAAGGTGATTAAGAATCAAGATATACCAAAGGACCAAAACAGAGAGTATGAATTGAAAAGTTCACCTgctaagagaaagaaaaagcacaagtcCAGAAAGAAAAGTGACACTATTCATAAAATGGAAAACCATctttattcagaagatgaagatgcaTTGACACAAAAAGATACTAATAGTGAAGAATGGGAGAACTTTAATCAAGTTGATGAAGGTTTTGATGGACGGAAAATTGGTAAATTATTCGTTTCAAATGAAGAGATTGCTAAGGGAAGCAATGGTACAATTGTCCTTGACGGAAGATATGAAGGTCGACCAGTTGCAGTTAAGCGTCTTGTCAAAGCTCATCACAAGGTAGCCTATAAAGAAATCCAAAACCTCATTGTGTCTGACCGTCATCCAAACATTGTCCGATGGCACGGGGTGGAGTATGATCAAGATTTTATTTACCTTGCACTGGAACGTTGTACTTGCAACTTGGATGATTTGATAAAGGGCCAAATGGAGACAGGGAAGGATAATACGCAATATCTTTGGAAAGAAAATGGCTATCCATCAGCTCTATTGCTGAAATTGATGAgGGATATTGTTTCAGGGGTTGTTCATTTGCATGATCTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTTCTAATAAACAACGAAAGATCCTTATGTGCAAAGCTTTCTGACATGGGCATTAGCAAACTTCTTCTTGAAAATATGTCCTCTTTGGGTCATAATGCTACTGGTGGGGGCAGTTCAGGTTGGCAAGCCCCAGAGCAGCTTGATCAAGGGCGCCAAACACGAGCTGTTGATATGTTCAGTTTAGGATGTATTCTTTTTTACTGTATGACTCGGGGAAGGCATCCATTTGGACAACATCTTGAACGTGATATCAATAtcgtgaaaaataaaaaaaatctttgctTAGTACAGTTCATTCCGGAAGCTGAGGATCTTATTAGTTGTTTATTAAACCCTGACCCTGATCTAAGGCTGAAAGCAATTGAAGTATTGCACCATCCTTTTTTCTGGAGTTCCGAGACGAGACTTTCATTTTTACGTGACACAAGTGATAGGGTGGAACTGGAAGAGAAAAATCTCAGTTCTAGTCTTTTGAGGGCGTTAGAAAGCATTGCCACAGCAGCCTTAGGTGGTAAATGGGATGAAAATATGGAACCAGCTTTCATTGCTAACATTAGTCGCTACCGGCGTTATAAGTTTAACAGTGTTCGAGACTTGTTGCGGGTTATGAGAAACAAGCTAAATCATTATGGAGAACTGCCTCAAGAAATCCAGGAACTAGTTGGACCTGTTCCTGAAGGATTCAATGACTACTTTGCAAACCGATTCCCAAGACTCTTGATTGAAGTTTATAATGTTATATGCAAGCATTGCAAGGAGGAAGAGTGTTTTCAaagATGTAATATCTAG 2640 0.3795 MKLFFLFIFLILSLLNQHCYIINTAFSRSPTSRSILSLPPPKAATTALIAALDGTMYLVASQENGSVRVIWSFSTGSPIYSSYQAPINKERGKKNTSSAPTSGFVECGDDWSLYMHDKILGKMRLSESIAEFVHRAPIISDDGTAIFGYKEDSLFEVDAKTGSIIQIHAKSDPGNASAPLRDDRLSAKNIISADNKDLVDPVKLNSSQPLLMLFRKDYTLKSVNTSSKIVLWNLTVTEFEAVLLCQHTTVDVEDEIPSVSGLNFAMPYPCQEMQNVFRVKKNFLLESLITESLLGPFHENDILSMSSFDPMIPLQPSVDRFFDGHDGNITFLPTPLPYSMPYLQQNNDTAYKLPQPLLEITSPGHVYLNKKSGWSTPLPRILFTVFLLVLGFSLICFLLVKVIKNQDIPKDQNREYELKSSPAKRKKKHKSRKKSDTIHKMENHLYSEDEDALTQKDTNSEEWENFNQVDEGFDGRKIGKLFVSNEEIAKGSNGTIVLDGRYEGRPVAVKRLVKAHHKVAYKEIQNLIVSDRHPNIVRWHGVEYDQDFIYLALERCTCNLDDLIKGQMETGKDNTQYLWKENGYPSALLLKLMRDIVSGVVHLHDLGIIHRDLKPQNVLINNERSLCAKLSDMGISKLLLENMSSLGHNATGGGSSGWQAPEQLDQGRQTRAVDMFSLGCILFYCMTRGRHPFGQHLERDINIVKNKKNLCLVQFIPEAEDLISCLLNPDPDLRLKAIEVLHHPFFWSSETRLSFLRDTSDRVELEEKNLSSSLLRALESIATAALGGKWDENMEPAFIANISRYRRYKFNSVRDLLRVMRNKLNHYGELPQEIQELVGPVPEGFNDYFANRFPRLLIEVYNVICKHCKEEECFQRCNI 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02676 879 MobiDBLite consensus disorder prediction 414 440 - -
Tsu04g02676 879 ProSiteProfiles KEN domain profile. 749 879 IPR010513 GO:0004540|GO:0006397
Tsu04g02676 879 Gene3D KEN domain 749 878 IPR038357 -
Tsu04g02676 879 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 7 876 - -
Tsu04g02676 879 ProSiteProfiles Protein kinase domain profile. 482 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02676 879 Pfam Protein kinase domain 484 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02676 879 Gene3D - 32 253 IPR015943 GO:0005515
Tsu04g02676 879 SUPERFAMILY Protein kinase-like (PK-like) 476 764 IPR011009 -
Tsu04g02676 879 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 53 236 IPR011047 -
Tsu04g02676 879 SMART PGNneu 811 865 - -
Tsu04g02676 879 PANTHER IRE1-RELATED 7 876 IPR045133 GO:0004521|GO:0004674|GO:0030968
Tsu04g02676 879 SMART serkin_6 482 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02676 879 Pfam Ribonuclease 2-5A 752 876 IPR010513 GO:0004540|GO:0006397
Tsu04g02676 879 CDD RNase_Ire1 750 877 - -
Tsu04g02676 879 Gene3D Phosphorylase Kinase; domain 1 469 554 - -
Tsu04g02676 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Tsu04g02676 879 Gene3D Transferase(Phosphotransferase) domain 1 555 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02676 Tsu-Chr4 30484013 30491719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02676 508 745 MAP Kinase Kinase Kinase AT3G06030 28.512 3.47e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Tsu04g02676 Pkinase 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02676 K08852 - gmx:100788389 1144.8