Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02660 atgaaaatgaaacaatATTTGTTGGAATGTACTCCATTTGCAGCAATGGTGATTGTAGAGTGCCTTGACGTGGGGATGACCACATTGAGTAAAGCAGCCATGTCCACAAAAGGGATGAACCATTTCATCTTTGTTCTCTATTCCAATGCTCTTGCTACTGTCATTCTCCTCCCTTCCTCTTTCCTCATCAACAGGACTACAAGACAACCCCTTTCTTTTTCCCTTCTTGGAAAGTTCTTCTTCCTCGGCCTTGTCGGCATAACTATCATGCAGAATTGTGTATTCACTGGCATAAGCTACAGCTCTCCCACCCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATCACTTTTGTTCTAGCAGTCATCTTCAGGATGGAGAAGTTGGATGTTGGAAGCTCAATAAGCCAGATCAAAATTGTGGGGACTATGGTGTCTATCTCAGGAGCATTTCTAGTGACCTTTTACAAGGGCGTTCCCATTGTCATCTTTCAAACTCAGCACTCTACATCGCAATCATTGGTGTCTCTATTGGCAGAAACCAGTAACTGGGTCATTGGAGGTCTCTTCCTAGCCATTGCCTCTATATCTCTTGCAGCATGGAATATTGCTCAGGCAGCAATTCTTAAAGGATATCCATCTCAGTTGACCATAGTTGCATTCTATTGCCTGTTTGGAACCTTTCAATGTGCAATACTTTCTCTGATTGTAGTCAAAGATCCAAGATCCTGGAAACTAAGTCCTGACATTGAGCTAATCTCTATAATGTATTCAGCTATTTTCGGAAGTGTGGTGACATTTTCTGTACTTACTTGGTGCATAGATAGGAAAGGACCTCTATTTGTTACCATGTTCAAGCCTGTTGGGATTGCCATTGCTGCATTTATGAGTGTTGCCTTCCTTGGTGAAACACTCCATATTGGCAGTGTCATCGGCGCACTAGTAATCGCCATTGGATTTTACGCAGTAATGTGGGCACAATCTAGCGAGAAAAATATGAAAGACCTCGAAGTTAATGGATTACCATCATCCTCTTCTACCCAAGAAAGTCCTCTACTAGAGTCTCCATGA 1071 0.422 MKMKQYLLECTPFAAMVIVECLDVGMTTLSKAAMSTKGMNHFIFVLYSNALATVILLPSSFLINRTTRQPLSFSLLGKFFFLGLVGITIMQNCVFTGISYSSPTLGSAMSNLTPAITFVLAVIFRMEKLDVGSSISQIKIVGTMVSISGAFLVTFYKGVPIVIFQTQHSTSQSLVSLLAETSNWVIGGLFLAIASISLAAWNIAQAAILKGYPSQLTIVAFYCLFGTFQCAILSLIVVKDPRSWKLSPDIELISIMYSAIFGSVVTFSVLTWCIDRKGPLFVTMFKPVGIAIAAFMSVAFLGETLHIGSVIGALVIAIGFYAVMWAQSSEKNMKDLEVNGLPSSSSTQESPLLESP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02660 356 PANTHER WAT1-RELATED PROTEIN 8 349 - -
Tsu04g02660 356 MobiDBLite consensus disorder prediction 337 356 - -
Tsu04g02660 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 328 - -
Tsu04g02660 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Tsu04g02660 356 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Tsu04g02660 356 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
Tsu04g02660 356 PANTHER WAT1-RELATED PROTEIN 8 349 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02660 Tsu-Chr4 30041810 30044090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02660 1 355 Nodulin-like Gene Family AT3G28050 44.865 1.48e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02660 - - ccaj:109809148 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01523 05 14758643 14769044 Tsu04g02660 04 30041810 30044090 ECH
Tsu04g02660 04 30041810 30044090 Tsu04g02660 04 30041810 30044090 ECH