Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02648 ATGAAGGAAACAAGTGATGGATTTGTTAGAGCAGATCAAATTGATCTAAAAAGCATAGATGAACAGCTTGAAAGACATCTCAACAAAGTTTTAACAATTGATAAGAAAAAACGTGgtgttgaagatgaagattctTCTACTGCTGCTTCTGCTTTTGATCATGTTCGTGTTCATACAAGTGCTAATACTTCACCTACATCTATTAAGTTCAAAACTAATTTCAAAAAGCAGAAACAGGATTGGGAAATTGATCCTTCTAAACTCATCATCAAAACTGTTATTGCTCGTGGAACTTTTGGAACTGTTCATCGTGGTGTTTATGATACTCAAGATGTTGCTGTTAAATTGCTTGATTGGGGTGAAGAAGGTCAAAGGACAGAAGCTGAAGTTTCTTCGCTGAGGGCGGCGTTTATACAGGAAGTTGCTGTTTGGCATAAACTTGATCATCCCAATGTCACAAAGTTTATAGGGGCAACTATGGGATCTGCAGAATTGCAGATACAAACTGAGACTGGTCTAATTGGCATGCCAAGCAATGTCTGTTGTGTTGTTGTGGAGTATCTTGCTGGAGGTACACTGAAATCATACCTAATAAAGAACAGGAGGAGGAAATTAGCTTTTAAGGTTGTCATCCAGCTGGTACTTGATTTAGCAAGAGGGTAA 663 0.371 MKETSDGFVRADQIDLKSIDEQLERHLNKVLTIDKKKRGVEDEDSSTAASAFDHVRVHTSANTSPTSIKFKTNFKKQKQDWEIDPSKLIIKTVIARGTFGTVHRGVYDTQDVAVKLLDWGEEGQRTEAEVSSLRAAFIQEVAVWHKLDHPNVTKFIGATMGSAELQIQTETGLIGMPSNVCCVVVEYLAGGTLKSYLIKNRRRKLAFKVVIQLVLDLARG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02648 220 Pfam Protein tyrosine and serine/threonine kinase 90 220 IPR001245 GO:0004672|GO:0006468
Tsu04g02648 220 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 220 - -
Tsu04g02648 220 Gene3D Phosphorylase Kinase; domain 1 76 172 - -
Tsu04g02648 220 ProSiteProfiles Protein kinase domain profile. 88 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02648 220 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 220 - -
Tsu04g02648 220 SUPERFAMILY Protein kinase-like (PK-like) 63 220 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02648 Tsu-Chr4 29944805 29949519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02648 1 220 MAP Kinase Kinase Kinase AT5G50000 69.820 1.53e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu04g02648 PK_Tyr_Ser-Thr 6.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02648 - - gmx:100807921 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02648 04 29944805 29949519 Tsu04g02648 04 29944805 29949519 ECH