Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02621 atgcaaaatttcaaCATTTTATGGGGAATCATCATTTTCATAATACCGTGGTTTTTGTCACGTGTGGGTTGCTACAATGTTGGGATACACGAAGCCGGTTTGACTTGTGATTCTTATCAGTACCCTGCAGATGATGATAACGACAACAAGTTAATGCAAAACTGGATGGTTGTAATGGATGCCGTTTCATTTCAGGTGAAAGAACACGGGTGGGGAGCGCAAGCATTAGTTGGTAATTGGCATCCAATGTACGCATTAGGCCAATGTCGTCGTGATCTCAATCACACAGAATGTGATACATGTTTTACCCAAGCCAGACAGTTGTTATCAAGGTGTGTGCCAAATGTTTCAGGTAGAATTTACCTTAATGGTTGCTTCCTTCGTTATGACAACTATACTTTCTTTGGAGAGAGCGTGAACGTCACACATGACACAAACATGTGTCGGTCTACGGAAAGGGGACAGACAGTAGATCCCTCACATGTTACATCAGTGATTTTGAATGTGAGTAAAGGTGAACATAGGTTTGCAGTGGACGAGGAAGGTGGTGTGTTTGCGCTTGCGCAATGTTGGGCGACGGTGGATAAATGGAGTTGTCAAAGATGTTTGAGAGAAGCGGCCCAAAGAGTGCAGGAATGTGTTCCTAGTACTGAGGGTAAAAGTTTGTTTACTGGTTGTTTTATGAGGTATTCAACGCGTAAATTCTACAACGACATTGTTGTGCTAAATGATACATGGGTTACTCCTTCTCCTTCTCGAGGTAgtaatcatcactttaattcaaTATCTTTCTCTATACATTCTATccaactaaatatattttctcttcatattttctttacaGAAGAAAGGCATAAGTGGATAATCCTTGCATGTGTAATATCAGCAATTGTAGTCATCATACTTATCATCCCTAGTGTATTTTTGAGCAACAACAGAACAACATCACACGAAAAAAGGAACAACAAATTTGGTCCATCCCCTAGTTTTACCAACGTAGCTGGTTTTAGTTTTAGGTTCGATGTGCTTGAGAAGGCAACAGGTTATTTTGATCCTACAAACAAATTAGGCATGCAAGGAGAAGGAAATCATAGTTCTGTGTACAAAGCAATACTTCCATCGGGAAGAACCGTTGCTGTTAAACGTTTGTTTTTCGACACACAACAATGGACAGATGTGTTATTCAATGAGATCAATTTGATTAATGGAATTCAACATAAGAATGTGGTGAAACTTTTGGGGTGTAGCACTGATGGCCCTGAAAGCCTCTTAGTTTATGAATTTCTTCCCTATAAAAGTCTTGATCAAATCCTTTTCGGAAAGGACTCAGAAAATGTTCTAACTTGGGAGAAGCGGTTTCAAATCATATGTGGGATAGCTGAGGGATTAGCATATCTTCATGAAGGATCTGGAAAAAAGATTGTTCACAGAGATATAAAGTCCAACAATATTCTGCTTGATGAAGCTCGAAATCCCAAAATTGTTAATTTTGGTCTTGCTCTTGGTGTTGATGAAAATAAATCTCATATTAACACCACTAAAATTGCAAAGACATTGGCACATACGGCTCCTGAGTGTATCGACCGAGGACAACTGATCGAGAAGGTAGATATATATGATTTTGGTGTGATGGTAACTGAAATTATTTGTGGTAAAAAGAATGGTGTTTTCACACAAGGGTCAGATTCACTACTCCACTATGTGTGGAAGAATTACCTCGCAAACAATATTACAATATCAGTTGATCATGCTCTGCATGGAAATTTTGTGGAAGAAGAGGCATCAAATGCTCTTCAAGCTTCCCTTCTTTGTACACAATCTTCTCCTAATCTTAGACCGTCCATGTTAGAAGTAGTTCAAATGCTAACAAAAAAAGACTACATTATTCCCATCCCAAAGGAACAACCATTCCTTAATTATACTAAGCATCGAACCTTAGGTTCCACTATGAGCATTATGTCAAATGGACTTACAAGTGCAAGATCATCTTTTCATAGCACAACTAGTTTCTTACATCCAGGTGAAGATGCGACACTACTAGAGAATCCTTTTTCTTCTGCTAGGTTCAACACTTCAGAGAGCCCTGATATCCAAACAAACATTGTGGTACCTCATCCAAGTCAAAAATCATtcattcttctttctttctttcttgccaCCTTCACCCATTTCTCCATTCACTCTCAACTCGCTCCATTCAACTCaatcttctcttctcttctcaacgATTTAGGTATTAGTATAGAGATGGATGTTATGGAGATTGTGAACTTATGTAGCGATGATGAAGGGGAGGACGGCGTTGTACTTTTAACTGTTAGTAGTGTAAACCAGCATCGAACCAACAAAGGCTTATCAACCAGAAATGAGAAGTATCAAAGTCATTCTACTAATCAAGTTTCTGAAGAAACTATAGTATCTAGTGGTCAAAGCTCGTGCCGTAGTTTTACGGGTACATCCGGACTTTCTAGTCCACAACCACTTTCTGCAAAACCCGATTGTAGGAAGTTTTGGAAAGCCGGAAATTATGATAATGGGCTTGGTTCGAAAGTCGGCTCCCAACATGCAAAAAACTATCTTCAGGTCCACCCCTTGTTCCTTCATTCGAATGCAACGTCACATAAGTGGGTATTTGGTGCCATAGCTGAGCTTCTTGATAATGCAGTTGATGAGATCCCAAATGGGGCTACTTTTGTCACGGTGGATAAGATTTTAAATCCGAAGGATGGAAGTCCAGCACTGTTGATTCAAGACGATGGTAGTGGAATGGATCCAGAAGCAATGCGACGTTGCATGAGCTTTGGATTTTCGGATAAGATGTCAGAATTTGCAATTGGACAGTATGGAAATGGTTTCAAGACTGGTAGTATGAGACTGGGTGCAGATGCAATTGTCTTTAGCTGCCACATGAATGATATGGTATGTACTAAAAGCATTGGACTTCTGTCTTATACATTCTTGGTGCAAGCACAACTTGACAGAATTGTAGTGCCCATGGTAAGTTATAAGTGTAACACATCAACTGGATACCTGGAAAAACTAAATCACCAAGAGCATTTTACGTCTAATCTGTCTTTGCTGCTGGACTGGTCTCCATTTCTCTCGGAAGCAGAACTCATGAAACAATTCGATAGCATTGGATATCATGGTACTAAAATTATTATCTTCAATTTATGGTTCAATGATGATGGGAATTTGGAACTAGACTTTGATACTGATCCTGAGGATATCCGTATTGCTGGAGATATCAAGAAGGTTGCTACCCTTCCGGCCTGGCAGGGAGTAAATGAGCAACACATTGCAAACCGGCTTCATTATTCTTTACGTGATTACTTGTCCATATTGTACTTGCGGGTGCCAGAAAGTTTTAGTTTCATATTGCGTGGGCAAGCTGTGAAGCTTCGTAACATAGCAGATGATCTAAAAGAGAGAGAGTATATCAAGTATAGACCCAAAAATGGTGTTTCAGAAGAGGCATTATATGTGACAATTGGATTTCTTAAGGAAGCTCCTGAAGTCGGCATCCACGGCTTCAATTTATATCACAAAAACCGATTGATAATGCCATTTTGGCGGGTTGTGAGCTATCACAATAGGGGAAGAGGagttgttgGCATGTTGCAAGCAGATATTGTTCAGCCAACTCATAATAAGCAAGATTTTGAGAGGACTTCCCTGTTTCAAAAGCTTGAAATGCGCTTGAAGGATATGACATGGGAATACTGGGATTTTCATTGTCATAAAATTGGGTATCATAAGGAAAAGAAGCAAAGAGGTCCAGTTGGCCCACTTAATTCATCTAACGCACAAGGCGGATCTGAACAAACATATCTTACCAAGAGGAAGACACATGGATTTATAGATCATCATGAGATGAAAAGGCAAGCAGCGGAAAAGAATGTAACAGGTTATTGTTGCAATCAGAAAGTACAGACTACCGCATCTCCTGCAGACCAGATGGTTGACCAAGAAACTATGAACTTGCTGGAACGGAAGAAGAAACTCATTGCTGAATGTTCTGCATTTGAAAAGGCGGAGGAGAAACTTAATCTTAAgGTGACAGAGCTTAGGAATAAACTTGAAGAAGCAAAGCTCGAGTATgaaagacttttggaagaagcAGTAGAATTAGACTGTCTGTGA 4143 0.3855 MQNFNILWGIIIFIIPWFLSRVGCYNVGIHEAGLTCDSYQYPADDDNDNKLMQNWMVVMDAVSFQVKEHGWGAQALVGNWHPMYALGQCRRDLNHTECDTCFTQARQLLSRCVPNVSGRIYLNGCFLRYDNYTFFGESVNVTHDTNMCRSTERGQTVDPSHVTSVILNVSKGEHRFAVDEEGGVFALAQCWATVDKWSCQRCLREAAQRVQECVPSTEGKSLFTGCFMRYSTRKFYNDIVVLNDTWVTPSPSRGSNHHFNSISFSIHSIQLNIFSLHIFFTEERHKWIILACVISAIVVIILIIPSVFLSNNRTTSHEKRNNKFGPSPSFTNVAGFSFRFDVLEKATGYFDPTNKLGMQGEGNHSSVYKAILPSGRTVAVKRLFFDTQQWTDVLFNEINLINGIQHKNVVKLLGCSTDGPESLLVYEFLPYKSLDQILFGKDSENVLTWEKRFQIICGIAEGLAYLHEGSGKKIVHRDIKSNNILLDEARNPKIVNFGLALGVDENKSHINTTKIAKTLAHTAPECIDRGQLIEKVDIYDFGVMVTEIICGKKNGVFTQGSDSLLHYVWKNYLANNITISVDHALHGNFVEEEASNALQASLLCTQSSPNLRPSMLEVVQMLTKKDYIIPIPKEQPFLNYTKHRTLGSTMSIMSNGLTSARSSFHSTTSFLHPGEDATLLENPFSSARFNTSESPDIQTNIVVPHPSQKSFILLSFFLATFTHFSIHSQLAPFNSIFSSLLNDLGISIEMDVMEIVNLCSDDEGEDGVVLLTVSSVNQHRTNKGLSTRNEKYQSHSTNQVSEETIVSSGQSSCRSFTGTSGLSSPQPLSAKPDCRKFWKAGNYDNGLGSKVGSQHAKNYLQVHPLFLHSNATSHKWVFGAIAELLDNAVDEIPNGATFVTVDKILNPKDGSPALLIQDDGSGMDPEAMRRCMSFGFSDKMSEFAIGQYGNGFKTGSMRLGADAIVFSCHMNDMVCTKSIGLLSYTFLVQAQLDRIVVPMVSYKCNTSTGYLEKLNHQEHFTSNLSLLLDWSPFLSEAELMKQFDSIGYHGTKIIIFNLWFNDDGNLELDFDTDPEDIRIAGDIKKVATLPAWQGVNEQHIANRLHYSLRDYLSILYLRVPESFSFILRGQAVKLRNIADDLKEREYIKYRPKNGVSEEALYVTIGFLKEAPEVGIHGFNLYHKNRLIMPFWRVVSYHNRGRGVVGMLQADIVQPTHNKQDFERTSLFQKLEMRLKDMTWEYWDFHCHKIGYHKEKKQRGPVGPLNSSNAQGGSEQTYLTKRKTHGFIDHHEMKRQAAEKNVTGYCCNQKVQTTASPADQMVDQETMNLLERKKKLIAECSAFEKAEEKLNLKVTELRNKLEEAKLEYERLLEEAVELDCL 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02621 1380 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 878 977 - -
Tsu04g02621 1380 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Tsu04g02621 1380 SUPERFAMILY Protein kinase-like (PK-like) 332 626 IPR011009 -
Tsu04g02621 1380 Pfam Morc6 ribosomal protein S5 domain 2-like 1106 1242 IPR041006 -
Tsu04g02621 1380 Gene3D - 35 134 IPR038408 -
Tsu04g02621 1380 Gene3D - 142 235 IPR038408 -
Tsu04g02621 1380 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 876 1079 IPR036890 -
Tsu04g02621 1380 Coils Coil 1339 1380 - -
Tsu04g02621 1380 MobiDBLite consensus disorder prediction 1261 1275 - -
Tsu04g02621 1380 ProSiteProfiles Protein kinase domain profile. 353 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02621 1380 ProSiteProfiles Gnk2-homologous domain profile. 135 235 IPR002902 -
Tsu04g02621 1380 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 285 704 - -
Tsu04g02621 1380 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 258 - -
Tsu04g02621 1380 SMART serkin_6 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02621 1380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Tsu04g02621 1380 Gene3D - 854 1056 IPR036890 -
Tsu04g02621 1380 Gene3D Phosphorylase Kinase; domain 1 329 428 - -
Tsu04g02621 1380 Pfam Protein kinase domain 360 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02621 1380 MobiDBLite consensus disorder prediction 782 804 - -
Tsu04g02621 1380 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 285 704 - -
Tsu04g02621 1380 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 258 - -
Tsu04g02621 1380 MobiDBLite consensus disorder prediction 1255 1275 - -
Tsu04g02621 1380 Pfam Salt stress response/antifungal 176 232 IPR002902 -
Tsu04g02621 1380 Pfam Salt stress response/antifungal 53 132 IPR002902 -
Tsu04g02621 1380 Gene3D Transferase(Phosphotransferase) domain 1 430 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02621 Tsu-Chr4 29621610 29641271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02621 42 639 Receptor kinase-like Gene Family AT1G70520 36.408 7.03e-121 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu04g02621 Pkinase 9.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02621 - - mtr:MTR_4g105530 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02621 04 29621610 29641271 Tsu04g02621 04 29621610 29641271 ECH