Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02617 ATGGAAGTTCCCAAATCCCCTTCCAAAGATAAGCGTTTTGCCACCAAACATAAATTCTTGTTCAAAATCATCGCACTCATTTTCATCCTCATATTGTTATTTCTAGGTTTCTATCTCGAGTCTTACAACTCGAAACCGAATAAATCGTGGTATTACACTGTTGTTATAGACTGTGGAAGCACAGGAACACGTGTTAATGTGTATCAATGGATGTTAGGGAATGTAGTAGTAGTAGGTAATAAAAGTTTGCCAATTTTGCTACATTCATTTCCTGATAATAATCAAACTACTAGGAATAGGAATAGTTCACTTTGGAAAAACTCTTGTCAATATCATTGTATGCAAACTGAACCCGGGTTAGATAAATTGGTTAATGATTCTTTAGGAGTGAGAGGAGCTTTGGAGCCTTTGATTTTATGGGCGGAAAGTTTAGTTCCGAGTGAAATGCACCGTGACACGCCTATTTTTGTTTTGGCTACAGCTGGAATGAGGAGGATTAAGAGGGATGATGCGTTTCGGGTTTTGGAGGATGTTGAGACTGTTGTGAAAGATCATTCTTTTATGTTTGATAAGAGATGGATTAGGGTTTTGAGTGGGAGGGAGGAAGCTTATTATGGTTGGGTGGCTTTGAATTATAAAATGGGAAGTTTTGATGATCATCATCTTCCTGGGTCTTCCACTTTGGGACTTGTTGATTTAGGTGGCTCATCGTTGCAGATTGTCGTGGAGATAGATCGTGATACTGGGGATGATGTGAATGCGATGAGATCGGAGTTTGGTTCGATTGAACATAGGATTGTGGCGTACTCGTTGCCTGCATTTGGGTTAAATGAAGCATTTGATAGGACTGTTGTTATGCTTGGAAATAAGCGGAGTGTGGAGAGAACTAGAGGTATATCTGAACTCAGGCATCCTTGTCTGATGTCTACTTTTGTACAAAACTATACCTGCAATTATTGCTCTGGATCTGATGCCGCTGACCCAAAAAATCATAGCCAACCCCGGAAAACATTAAGTCTTATCGGAGAACCTGACTGGGAACAATGCAGAGAAATAGCTATTGCTGCTGCAATGAATTTGAGCGAATCCCGTGTTTCACATCAGGCAGTTGGTCCAAATTGCCAAGCAAGTTTATTTTCTGGTATTGGCACTGGTGCACTTAATTTAACAGCTGTTGCTCACCCAACAAAGCGATTTCATGCTTTATCTGGTTTCTTTTTTGTCTACAATAAGCTAAATTTGAGCTCAAAAGCCAATTTAACAATGATTTGGGAGTCAGGCAAGCAAATATGTTCAAATTTATGGGCTGGCTTGAGTAGTACTCCTGACAATCCAAATTACGCTGGACAATTTTGTTTCCGGGTGGCTTATATGGCATCGCTGATCGAGTATGGTCTGTGTCTTGGTGATGTAGAAATGGAATTTGGTCCAGGCGATGTTTCCTGGACATTAGGAGCTGCATTAGTTGAAGGGAAGTTTCAGTGGTTAAATATTGCAAACCACAAATCCCAGACTATAATTTCAACTTTAAAGAATGTGAAGGTCATGTCATCTTCAACTTCTCTTTTTGCTGTACTTCTGTTGCTTTTATTGATTGTTTATTGTACTCAAATCAAGCTACCTATGCCAAGCAGAAGGGCTTCTGCTCCTGGCTCATCTTTGTCATCCCATACTCATACAAGACACCGATCTTACTAA 1698 0.3999 MEVPKSPSKDKRFATKHKFLFKIIALIFILILLFLGFYLESYNSKPNKSWYYTVVIDCGSTGTRVNVYQWMLGNVVVVGNKSLPILLHSFPDNNQTTRNRNSSLWKNSCQYHCMQTEPGLDKLVNDSLGVRGALEPLILWAESLVPSEMHRDTPIFVLATAGMRRIKRDDAFRVLEDVETVVKDHSFMFDKRWIRVLSGREEAYYGWVALNYKMGSFDDHHLPGSSTLGLVDLGGSSLQIVVEIDRDTGDDVNAMRSEFGSIEHRIVAYSLPAFGLNEAFDRTVVMLGNKRSVERTRGISELRHPCLMSTFVQNYTCNYCSGSDAADPKNHSQPRKTLSLIGEPDWEQCREIAIAAAMNLSESRVSHQAVGPNCQASLFSGIGTGALNLTAVAHPTKRFHALSGFFFVYNKLNLSSKANLTMIWESGKQICSNLWAGLSSTPDNPNYAGQFCFRVAYMASLIEYGLCLGDVEMEFGPGDVSWTLGAALVEGKFQWLNIANHKSQTIISTLKNVKVMSSSTSLFAVLLLLLLIVYCTQIKLPMPSRRASAPGSSLSSHTHTRHRSY 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02617 565 Gene3D - 40 198 - -
Tsu04g02617 565 Pfam GDA1/CD39 (nucleoside phosphatase) family 48 492 IPR000407 GO:0016787
Tsu04g02617 565 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 4 564 IPR000407 GO:0016787
Tsu04g02617 565 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 4 564 - -
Tsu04g02617 565 MobiDBLite consensus disorder prediction 543 565 - -
Tsu04g02617 565 Gene3D Exopolyphosphatase. Domain 2 199 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02617 Tsu-Chr4 29585397 29588782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02617 14 490 Nodulin-like Gene Family AT4G19180 35.464 2.98e-93 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02617 - - gmx:100775757 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02617 04 29585397 29588782 Tsu04g02617 04 29585397 29588782 ECH