Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02594 ATGCTTTCATTTTCGAACTCCATTTCTTCCATGGATTCCTTTTGTCCCATACGTGAATCATTCAGAGAAATTGATCAACAGATCGATGAATCATACAGTAAAATCTTTGAGACACTTGCAACATTGCGTGGCATAGTGCAAAGCCAAATTTTTGCATCCAAAACATCAATTGATACATCAGAATCATCTACCACTATAGAAGACAAAATGATTGTCCCGTGTCAATTGCATGTTACAGAGATTCAACAACCCATAGAAGTGGTGATGCAATCAAGTGATCTTAATGACAAATTAATTGTTCTACCAGAATCAATTGAAGTCAATTCGATCTTGAAGGTAACTAAAACACCGGTGACAACGAAGGAACATCAAATGTCGGTGAAAACGCAAGCCTGTTCGACAGTGTTGTTGGCCGACATTCCATTAGTAATGGAACAATTTGCTGTGAAAAAAATCACTGTGGCGGGTACAATTCAACGACAACAAGTTGCAGTTCCTAAAAAGGTTCTTAAGATCATGGATTGTGTTGACTTGACATTACATCATGTAGCTAGTCATTTGCAGaaatatagaaaatatttaaaaggtGGGATAAAAAAGTCAAAGttgaatgaatttgaatttcaagGTCAGAAGAACAATGAAACACAATACTCAATGACGGCACAAGATCAATGTCACGATAAAAGTCCTGTAGAACAACATTCGacataa 714 0.3501 MLSFSNSISSMDSFCPIRESFREIDQQIDESYSKIFETLATLRGIVQSQIFASKTSIDTSESSTTIEDKMIVPCQLHVTEIQQPIEVVMQSSDLNDKLIVLPESIEVNSILKVTKTPVTTKEHQMSVKTQACSTVLLADIPLVMEQFAVKKITVAGTIQRQQVAVPKKVLKIMDCVDLTLHHVASHLQKYRKYLKGGIKKSKLNEFEFQGQKNNETQYSMTAQDQCHDKSPVEQHST 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02594 237 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 160 192 IPR006447 GO:0003677
Tsu04g02594 237 Gene3D - 140 196 - -
Tsu04g02594 237 SUPERFAMILY Homeodomain-like 162 195 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02594 Tsu-Chr4 29298468 29300243 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02594 164 224 Response Regulator Gene Family AT3G16857 47.619 1.83e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu04g02594 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02594 - K14491 mtr:MTR_4g021760 56.9954