Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02592 ATGTGTTCTCTACACTATTCACCACACCTGCAATCGATTACGCTATCAAGCCAAAGTGATCCACATGAACTCCAGGAGGCTAAAGAGCTTAAAAGGCGAGGAAGAGATGATGTTGATGTTTCGCGAAAGGCTTTTAGCCAAAGTGATCCACATGAACTCGAGGAGGCTAAAAGGCTTAAAAAGCGACGAAGATATGATGTTGATGTTTCAAAACAACCTCTTGCAAAGAAAACACGACTCTCTTGGAGACTTGATTTGCACCAAAAATTTATGTCGGCTGTGAATCATCTTGGGATTAACAATGCAGTTCCTAAAAAGGTTCTTAAGATCATGGATTGTGTTGACTTGACGTTACAGCATGTAGCTAGTCATTTGCAGAAGAACAATGAAACACGATACTCAATGACGGCACAAGATCAATGTCACGATAATAGTCCTGCAGAACAACATTCGACagagattgattttgattttcaagGTCATAAGAACAATGAAACACAATACTCAATGACGTCACATGATCAATGTCACGATAAAAGTCCTGCAGAACAACATTGGCTGGGCTATGAGTTCTTACAGTTGACCATGACGCAGATGTTCTCTACACTATTCACCACATCTGCAATCGATTACGCTATCAAGAGTTATTGGACTAAACCATTATATGCGAATCTATTCAAGAATACATGGCAACATGTTGTGCGAAAGTCTTTCAGCCAAAGTGATCCAAATGAACTCGAGGAGGCTAAAGGGCTTAAAAAGCGAGGAAGAGATGATGTTAATGTTATGCGAAAGGGTTTCAGCCAAAGTTATCCACATGAACTCGAGGAGGCTAAAGGGATTAAAAAGCGACGAAGAGATGATGTTGATGTTTCAAAACAACCTCTTGTAAAGAAAACTCATCTCTCTTGGACACTTGATTTGCATGAAAAATTTATGTCCGCTGTGAATCATCTTGGATTAACAGTTTGA 972 0.3899 MCSLHYSPHLQSITLSSQSDPHELQEAKELKRRGRDDVDVSRKAFSQSDPHELEEAKRLKKRRRYDVDVSKQPLAKKTRLSWRLDLHQKFMSAVNHLGINNAVPKKVLKIMDCVDLTLQHVASHLQKNNETRYSMTAQDQCHDNSPAEQHSTEIDFDFQGHKNNETQYSMTSHDQCHDKSPAEQHWLGYEFLQLTMTQMFSTLFTTSAIDYAIKSYWTKPLYANLFKNTWQHVVRKSFSQSDPNELEEAKGLKKRGRDDVNVMRKGFSQSYPHELEEAKGIKKRRRDDVDVSKQPLVKKTHLSWTLDLHEKFMSAVNHLGLTV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02592 323 SUPERFAMILY Homeodomain-like 75 128 IPR009057 -
Tsu04g02592 323 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 77 127 IPR006447 GO:0003677
Tsu04g02592 323 MobiDBLite consensus disorder prediction 13 63 - -
Tsu04g02592 323 PANTHER TWO-COMPONENT RESPONSE REGULATOR 40 154 IPR045279 GO:0009736
Tsu04g02592 323 PANTHER TWO-COMPONENT RESPONSE REGULATOR 188 321 IPR045279 GO:0009736
Tsu04g02592 323 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 188 321 - -
Tsu04g02592 323 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 40 154 - -
Tsu04g02592 323 MobiDBLite consensus disorder prediction 22 63 - -
Tsu04g02592 323 Gene3D - 74 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02592 Tsu-Chr4 29290054 29293324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02592 76 127 Response Regulator Gene Family AT3G16857 55.769 1.79e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu04g02592 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02592 - K14491 mtr:MTR_4g021760 93.9745