Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02587 ATGGAAAATAAGGATGGTAACCCAAAAGAAGCAAAGGATTATTATTCTAGATCAATATGGTGGTCAGAAACAGCACAAGCATTTGAAGATCATAAAATATATGACACAAATGGAACTTATAGCTTTCAAGAAATTATGACTCCAGAAATTTCTGAAAAATTTGGAGAACTCAAAAGTTTAACTAGTAACAGAAATAGAGTTAATGAAATAGTACTAGATGATGGTAGCGATGAAAACGGCGAATTTGTTGTTCCTTATTCTATACAAATATTGTCAACAGAAATTGTAGAAATAGTTGAGGATGGAAAGAGTATAACAATCCACAAAGATAGAAGAGTTGATGATCTTTATGTTGCTGTTGGAGAAGATGATTTGGATGTTGTTAAATGGGCTCTTGATCATGCTGTTTCTCCTGGTTCTAGGATTTTTCTTGTTCATGTTTCTCCTCCAATAACATTGATTCCTACACCAGTTGGGATGCTTGAAAGAAACCAGTTGACTCCACAACAAGTAAGGCGTTACCTAAATGAAGTGAACAATAAGAGGAAAGATCTTTTGCAGAACTATATCCAGCTGAGTACTGAAGCAAAGGTAACTGCAGAAACGTTGATTCTAGAGAGCAAATTCAAAGGACAAGCAATTTTGGATCTCATCTCTATTCTTAACATAACCAACCTTGTATTAGGAATCAAAAAGCTACCCTGCAGAAGGCGCAATGATAAATTGAGCGAAGGAGTATTCGTAAAGAAAAATGCACCAAAGACATGTGATGTTACCTTGATTTACAATGGTGTGATGGCCGAGGAACAGACTCCAGCCTCGACTTCAAACGTTGACGGAGACGATTACGCGTGGGTGGCCGATGAGCCGAGGACCACGACGACTGGAAAGCCTGTATACCGAACACCACCCGTCGTATTTGCAGCAAATTCCAGTGGGGTTCCTTCCCCATGTATCAAATTGCGTTCGAGCACATGGGCTATAGATTGCCCTTCAGTGACTTCGAGGTCGCAGTTTTCAGATACTTACACCTTACACCCTCCCAGCTGCATCCGAACTCTTTAG 1065 0.3962 MENKDGNPKEAKDYYSRSIWWSETAQAFEDHKIYDTNGTYSFQEIMTPEISEKFGELKSLTSNRNRVNEIVLDDGSDENGEFVVPYSIQILSTEIVEIVEDGKSITIHKDRRVDDLYVAVGEDDLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGMLERNQLTPQQVRRYLNEVNNKRKDLLQNYIQLSTEAKVTAETLILESKFKGQAILDLISILNITNLVLGIKKLPCRRRNDKLSEGVFVKKNAPKTCDVTLIYNGVMAEEQTPASTSNVDGDDYAWVADEPRTTTTGKPVYRTPPVVFAANSSGVPSPCIKLRSSTWAIDCPSVTSRSQFSDTYTLHPPSCIRTL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02587 354 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 122 233 - -
Tsu04g02587 354 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 84 272 - -
Tsu04g02587 354 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 84 272 - -
Tsu04g02587 354 Pfam Universal stress protein family 122 233 IPR006016 -
Tsu04g02587 354 Gene3D HUPs 117 245 IPR014729 -
Tsu04g02587 354 Coils Coil 175 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02587 Tsu-Chr4 29199006 29204437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02587 114 266 U-box Gene Family AT3G61390 30.189 6.05e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02587 - - pvu:PHAVU_003G204300g 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02587 04 29199006 29204437 Tsu04g02587 04 29199006 29204437 ECH