Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02585 ATGGATATCCCCTTCTTCCACTTCCTCCTCCACCTTCTCCTCCTTATCCCCACCATTAACTCCCTCGACTTTATCTTCAACTCTTTCAACACAACCACAAAAAACCTCACTCTCACCAACGACACCAGAATTGAATCTCCCGTAATCCGTATGACCAACGACTCTAACCAATTCTCTCTCGGTCGTTTCTTCTACCCTTCTAAAATCCCAATCACTTCCTTCTCCACTTCATTCATCTTCTCCATCTTACCTCAAAACCCTAACAGCCCCGGTTTCGGTCTCGCTTTTTTCCTCTGTAATACATCTTCCCCTCCCGGCGCAATCGCTAGTCAATACTTCGGTTTATTCACTAACGCCGTTATTCCAACCGTTTTCCCTCTAATCGCTGTCGAATTCGATACCGGAAGAAACCCTGAGTTCAACGATCACGATAATAATCACATCGGAATTGATCTCAATAACATTgagtcaaaaaaacaaacacctGCTGGGTATTATAACTCTACTGGAAAATTTGAATCTGTGCAAATGAACAGTGGAGAAAATGTTCGTGCGTGGATTGAATTTGACGGCAAGAGTTTCGAGATAAATGTTACAGTTGCTCCGATTGGTGTTTCAAAGCCTTTGAAACCAACACTTTCGTATAAAGATCCGAATATAAGTAATTATCTTTCTCCTGAaatgtttgttggtttttcagcTTCGAAAACGAATTGGATTGAAGCTCAGAGAGTTTTAGCATGGAGTTTTAGTGATTCAGGAACTGCTAAGGAGTTAAACACGACGAATTTACCGGTTTTTAAGCGAGGATCGTCGAATTCGCTTTCTGGTAAAGCGATTGCGGGGATTGTAGTtggttgttttgttttagtgtgttttagtttgtttgtattatattttgtatggtgtaaaagaagaagaaatgaagaagatgatgatgatgtggaAGAATGGGAAATGGAGTATTGGCCTCATAGATTTTCTTATGAGGAACTATGTATAGCTACAAAGGATTTTCATAATGAGAAGCTTATAGGTTCTGGAGGGTTTGGAAGAGTTTACAAAGGAACATTGATGAATCAAACATTGATTGCAGTTAAGTGTGTTAATCATGATTCTAAACAAGGGTTAAGAGAGTTTATGGCAGAGATTTCAAGTATGGGAAGGCTTCAGCATAAGAATTTAGTGCAAATGAAAGGGTGGTGTAGAAAGGGTAATGAACTTATGTTGGTTTATGATTATATGCCTAATGGAAGCTTAAACAAATGGGTTTTTGATAAACCTGAGAAAGTTTTGGGATGGAATCAGCGACGTAGGATTCTTGTTGATGTAGCAGAAGGGCTTAACTATCTTCATCATGGTTGGGATCAGGTTGTTATTCATAGGGATATTAAATCTAGTAATATTTTGTTGGATGCTGATATGAGAGGAAGATTGGGAGATTTTGGTTTGGCTAAGCTTTACCAACATGGGCAAGTTCCTAATACTACACGTGTGGTGGGGACAATAGGGTATTTGGCACCGGAAATAGCGAACGTTGCAGCGCCGACTTCGGCGAGTGATGTGTATAGTTTTGGGGTGGTGTTGTTGGAAGTGGCTTGTGGAAGGAGGCCGTTGGAGGCGATGGTGGTGGATGAGGAAGTGGTGCTTATTGATTGGGTTAGGGAGTTGTATGCAAGAGGGTGTGTAGTTGAAGCTGCGGATAGTAGAATGAAGGGTGAGTATGATGTGGGTGATATGGAGATGGTGTTGAAGCTTGGGTTGGCTTGTTGTCATCCTGAGCCAAATAGGAGGCCGACTATGAAGGAAGTTGTTGCACTTCTTCTTGGCGAGGATGTTGCGGATGCACCGGGGAAAGTTTTGTCCGATTTGGCTCGCGGTGATGataatggtggtggtggtggggaATTGGATGAGGAGGCGCCTTTGCAATCCTCCTCTCCTATTTGA 1950 0.3918 MDIPFFHFLLHLLLLIPTINSLDFIFNSFNTTTKNLTLTNDTRIESPVIRMTNDSNQFSLGRFFYPSKIPITSFSTSFIFSILPQNPNSPGFGLAFFLCNTSSPPGAIASQYFGLFTNAVIPTVFPLIAVEFDTGRNPEFNDHDNNHIGIDLNNIESKKQTPAGYYNSTGKFESVQMNSGENVRAWIEFDGKSFEINVTVAPIGVSKPLKPTLSYKDPNISNYLSPEMFVGFSASKTNWIEAQRVLAWSFSDSGTAKELNTTNLPVFKRGSSNSLSGKAIAGIVVGCFVLVCFSLFVLYFVWCKRRRNEEDDDDVEEWEMEYWPHRFSYEELCIATKDFHNEKLIGSGGFGRVYKGTLMNQTLIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMKGWCRKGNELMLVYDYMPNGSLNKWVFDKPEKVLGWNQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYQHGQVPNTTRVVGTIGYLAPEIANVAAPTSASDVYSFGVVLLEVACGRRPLEAMVVDEEVVLIDWVRELYARGCVVEAADSRMKGEYDVGDMEMVLKLGLACCHPEPNRRPTMKEVVALLLGEDVADAPGKVLSDLARGDDNGGGGGELDEEAPLQSSSPI 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02585 649 CDD lectin_legume_LecRK_Arcelin_ConA 22 254 IPR001220 GO:0030246
Tsu04g02585 649 SUPERFAMILY Protein kinase-like (PK-like) 316 608 IPR011009 -
Tsu04g02585 649 PANTHER - 8 637 - -
Tsu04g02585 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Tsu04g02585 649 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Tsu04g02585 649 Gene3D Phosphorylase Kinase; domain 1 308 414 - -
Tsu04g02585 649 Gene3D - 19 268 - -
Tsu04g02585 649 Pfam Legume lectin domain 21 264 IPR001220 GO:0030246
Tsu04g02585 649 ProSiteProfiles Protein kinase domain profile. 339 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02585 649 MobiDBLite consensus disorder prediction 620 649 - -
Tsu04g02585 649 CDD STKc_IRAK 345 608 - -
Tsu04g02585 649 SMART serkin_6 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02585 649 ProSitePatterns Legume lectins beta-chain signature. 128 134 IPR019825 -
Tsu04g02585 649 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 8 637 - -
Tsu04g02585 649 Pfam Protein kinase domain 339 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02585 649 Gene3D Transferase(Phosphotransferase) domain 1 415 615 - -
Tsu04g02585 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 267 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02585 Tsu-Chr4 29181075 29183403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02585 20 615 Receptor kinase-like Gene Family AT1G15530 62.582 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu04g02585 Pkinase 5.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02585 - - gmx:100780660 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02585 04 29181075 29183403 Tsu04g02585 04 29181075 29183403 ECH