Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02584 ATGGAATCAAATCCCAAAAATACCATCAAATTCCTCTTTAGCTACGGTGGCAAAATCCTTCCCCGCCTCACTGACGGCAAGCTCCGATACTCCGGCGGCCACACCAGAGTCCTCGCACTCCCTCCCCCCATTTCATTCTCAGGATTAATGGTGAAGCTTATGGAATTATGTGTTTCATCATCAGTAACATTAAAATGTCCATTACCAAATGGAGATTTAGAGACATTGATTTCAATCACCAGTGATGTAGATCTAGCAACTATAATTGAAGAATACGATAGAGCTTCTTCATCATTAACTCATCCATTGAAGATAAGAGTCATTCTTTCACCGCCCAAATCTGTGAAGAAATTGTCTCCTCCTCCGTCTTCTTCGTCCAGTGCAACTCAATCTCCGTCTGGTTCGCTTTCAGAATCACTGCCGTATGCGGCTGTGAATCgaattaaccacttgagttgcTCGCCGGTTTCAGTTGGTTATCCGATTGGTATTCGAAATGGAGTGAAAGGTAGTTGTTACAAAGGGCAATTAGATGGAAGCCCTAGATTTCTTTATCGTTTCTGTAACAATTATTGCCACTGA 582 0.4124 MESNPKNTIKFLFSYGGKILPRLTDGKLRYSGGHTRVLALPPPISFSGLMVKLMELCVSSSVTLKCPLPNGDLETLISITSDVDLATIIEEYDRASSSLTHPLKIRVILSPPKSVKKLSPPPSSSSSATQSPSGSLSESLPYAAVNRINHLSCSPVSVGYPIGIRNGVKGSCYKGQLDGSPRFLYRFCNNYCH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02584 193 SUPERFAMILY CAD & PB1 domains 25 119 - -
Tsu04g02584 193 Gene3D - 27 110 - -
Tsu04g02584 193 MobiDBLite consensus disorder prediction 114 135 - -
Tsu04g02584 193 Pfam PB1 domain 25 99 IPR000270 GO:0005515
Tsu04g02584 193 SMART PB1_new 23 110 IPR000270 GO:0005515
Tsu04g02584 193 MobiDBLite consensus disorder prediction 119 135 - -
Tsu04g02584 193 CDD PB1_UP2 14 109 - -
Tsu04g02584 193 PANTHER PB1 DOMAIN PROTEIN 1 193 - -
Tsu04g02584 193 PANTHER OS05G0427100 PROTEIN-RELATED 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02584 Tsu-Chr4 29159749 29160871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02584 7 91 MAP Kinase Kinase Kinase AT2G35050 47.059 8.52e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02584 - - mtr:MTR_4g105020 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02584 04 29159749 29160871 Tsu04g02584 04 29159749 29160871 ECH
Tsu04g02584 04 29159749 29160871 Tsu03g02307 03 26096353 26097058 PCT