Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02575 ATGGAAATAACGGAAACTCATGATCACACATTTTCAAACCGAGTCCAAACTACAGCTACAAATATCTTATTTTATGGATGTACGGATGTTGGTTTTGCAAATTATGGAGAAAATTggagacaaaaaagaaaaatatgtgttCTAGAACTTTTGAGCGTGAAAAGAGTACAATCATTTCGTCAaattagagaagaagaagttgacgAATTGGTGAGTAAGCTACGCAAAGCTAGCTCGAATGGTGCATATGTTAATTTAAGTGAGTTGTTTATTGAAACTTCAAACAATATCATTTGTACATGTTCTCTTGGAAGAAAATATGGAGGAGCTAGTGAAAGTGACAATAGGGTGAAAGAGTTAGCAAAGGATACTATGACTCATCTTTCTACTTTTATTTTGGGAGATTACTTCCCTTCATTGGGTTGGGTTGATGTTCTTAGTGGAAAAATTGGGAAAATCAAGGACACTTCTCTAGCATTGGATCATGTGTTTGATCAAGTGATTGAAGAGCAGGATGGCATGCATGGCTTTGAGCTCTCCAATAATGATATCAAAGCAATTCTAGGaAACATGATTGTGGGAGGAACGGACACAACCGCAACAGCATTAGAATGGGTAGTTTCAGAGCTAATGAAACATCCGGCCATAAtgaagaaaacacaagaagaagTAAGAAGAGTTGTAAATGCTAAATCAAAAGTAGAAGAAAGTGACATCAATAAAATGAACTATTTAAAGTGTGTAGTGAAAGAAACACTCAGATTACATCCGGTTCTTCCTCTTTTGGTTCCTCGAGAAACAATATCTAGCGTGAAGTTAAACGGATATGACATTCCTGAAAATACAAGTGTATATTTCAATGCATGGGCAATACAAAGGGAGCCTAAAAATTGGGAAAACCCAGATGAATTCAAGCCAAAGAGATTTGAACACAACCAAGATGAATTTAAAGTTCaagattttcattttattccATTTGGTTTTGGGAGAAGGGGATGTCCTTGA 1005 0.3333 MEITETHDHTFSNRVQTTATNILFYGCTDVGFANYGENWRQKRKICVLELLSVKRVQSFRQIREEEVDELVSKLRKASSNGAYVNLSELFIETSNNIICTCSLGRKYGGASESDNRVKELAKDTMTHLSTFILGDYFPSLGWVDVLSGKIGKIKDTSLALDHVFDQVIEEQDGMHGFELSNNDIKAILGNMIVGGTDTTATALEWVVSELMKHPAIMKKTQEEVRRVVNAKSKVEESDINKMNYLKCVVKETLRLHPVLPLLVPRETISSVKLNGYDIPENTSVYFNAWAIQREPKNWENPDEFKPKRFEHNQDEFKVQDFHFIPFGFGRRGCP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02575 334 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 171 334 - -
Tsu04g02575 334 PRINTS P450 superfamily signature 194 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 PRINTS P450 superfamily signature 324 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 PRINTS P450 superfamily signature 247 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 Pfam Cytochrome P450 6 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 Pfam Cytochrome P450 165 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 PANTHER CYTOCHROME P450 71B11-RELATED 171 334 - -
Tsu04g02575 334 PANTHER CYTOCHROME P450 71B11-RELATED 1 171 - -
Tsu04g02575 334 SUPERFAMILY Cytochrome P450 2 334 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 171 - -
Tsu04g02575 334 Coils Coil 217 237 - -
Tsu04g02575 334 Gene3D Cytochrome P450 1 334 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 PRINTS E-class P450 group I signature 287 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 PRINTS E-class P450 group I signature 323 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 PRINTS E-class P450 group I signature 93 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02575 334 PRINTS E-class P450 group I signature 246 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02575 Tsu-Chr4 29032365 29034393 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02575 2 334 Cytochrome P450 AT3G48270 41.525 1.20e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02575 K20617 - gmx:100781362 420.239