Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02573 ATGATCAGGAATTGTTTCTGCTTCAAAGGTTCTGCGCTTCAAGAGGACATGTTTATTGGAGGTACAGACACCGTATCCAGTTTGTTAGAGTGGGAATTGACAGAACTCATAAGACATCCAAATATCATGAAGAAATTCAAGAAGAAGGAAGAACAGTGGCTAATGTTGATTCCATTTGGAACTGGAAGAAGAGGTTGTCCTGGAATAGCTTATGTTACGGCTGTCAATGAACTTGTGTTAGCCAACCTTGTACATCAATTTAACTGGAAATTACCCGGTGGTACTGAAGAATTGGAGAAATTAGACAGGTCTGAAACAATTGGCTTTATTGCACATAGAAATACTCCTCTTGTGGCACTTGCAGTCCCTAATAAGAAGTAA 381 0.3937 MIRNCFCFKGSALQEDMFIGGTDTVSSLLEWELTELIRHPNIMKKFKKKEEQWLMLIPFGTGRRGCPGIAYVTAVNELVLANLVHQFNWKLPGGTEELEKLDRSETIGFIAHRNTPLVALAVPNKK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02573 126 Pfam Cytochrome P450 15 47 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02573 126 Pfam Cytochrome P450 55 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02573 126 Gene3D Cytochrome P450 11 49 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02573 126 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 49 - -
Tsu04g02573 126 PANTHER CYTOCHROME P450 FAMILY PROTEIN 54 125 - -
Tsu04g02573 126 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 59 68 IPR017972 GO:0005506|GO:0016705
Tsu04g02573 126 Gene3D Cytochrome P450 50 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02573 126 PANTHER CYTOCHROME P450 71B11-RELATED 12 49 - -
Tsu04g02573 126 PANTHER CYTOCHROME P450 71B11-RELATED 54 125 - -
Tsu04g02573 126 SUPERFAMILY Cytochrome P450 16 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02573 Tsu-Chr4 29017400 29019378 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02573 12 49 Cytochrome P450 AT3G48280 44.737 7.39e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02573 - - mtr:MTR_4g104540 97.8265