Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02568 ATGCCTAACTCTAAGTGCAACACATGTTTGAAAAAGCCAATGGCTCTCAAAAAATGGTCACATGAACAAATTAAAGGAGCTTTTTGTTCTCCCATTTGTCTatctatttttttcattgtAAGTGTGTTGATTGtgtttaaattttcaattaaaaaaccCAAATCTAAATCCAAAACTAATCTAAATCAACTTCCATATCCACCTAAACTACCTATCATTGGTAATCTTCATCAACTAGGCACACTTCCACACCGTTCTCTTAGGGACCTATCACTCAAATATGGCAACATGATGTTATTGCAATTGGGACAAAAACCAACTCCAACTCTAGTGGTTACATCAGCAGATGTAGCCATggaaatcatgaaaaatcatGATAAAGTTTTTTCAAACCGACCCCAACATATAGCTCCAAAAATCTTGTTGTATGGATGTACCGAGGTTGGTTTTGGACTTTATGgaaaaaattggaaagaaaaaagaaaattatgtgTTGGAGAACTCTTAAACATGAAAAATGTGCAATCATCTCATCCcattagagaagaagaagttgaagaGTTGGTGAATAAGCTACGAGAAGCTAGCTTGAATGATGCATGTGTGAATCTAAGTGAAATGCTTATTTCAACAATAAACAACATTGTTTGTAAATGTGCTCTTGGAAGGAAGTATGGAGAAGCTAGTGTAGGCAATTTCAAAGAGTTAGCAAGGAAGGTTATGATTTATCTTACAACTTTTGTTGTTGGAGATTACTTCCCTTCTTTGAGTTGGATTGATGTTCTTAGtggaaaaattggaaaaattaaGGATACCTTTCAAGCACTTGATGGTTTCTTTGATCAAGTGATTGAAGAGCGTTTGGCTTTGAAGAAGATggaaaataatcaattaaagaaaaaagtgtTTGTGGATATTCTACTTCAACTCCAAGAGGATGGCATGCTTGGCTTTGAGTTCTCCAATAATGATATCAAAGGACTCCTAATggACATGTTTGTTGGAGGAATTGACACAACCTCAGCAATATTAGAATGGACAATTTCAGAGTTAATGAGACATCCAATCATAATGAAGAAAGCACAGGAAGAAGTAAGAAGAATTGTTGGAAATAGAtcaaaagttgaagaaaatgaCATCAACCAAATGCACTATTTAAAGTGTGTAGTGAAAGAAAGTCTAAGGTTACATCCAGCTACTCCTCTCATTCCTCCTAGAGAAACAATATCTAGTGTAAATCTAAAAGGGTATGATATTCCTGAAAAAACAGTGGTATATGTGAATGCATGGGCAATACAAAGAGACCCTAAAAACTGGGAGAATCCTGAAGAGTTCATGCCAGAGAGATTTGAACACaacataattgattttatagGTCAAGATTCTCAATTTATCCCTTTTGGTTTTGGAAGAAGGGGGTGTCCTGGAATGAATTTTGGAGTAGCTACCGTTGAATATGTACTTGCTAGTCTCCTTTGTTGGTTCAATTGGAAGCTACCAACTCAAACAAATTTAGTGAAACAAAATATAGATATGAACGAAGTATTCGGACTTGTTGTCACAAAGAAAGAACCGCTTCACCTTAAACCAATAACCTTTTTAGTTTAA 1608 0.3203 MPNSKCNTCLKKPMALKKWSHEQIKGAFCSPICLSIFFIVSVLIVFKFSIKKPKSKSKTNLNQLPYPPKLPIIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQKPTPTLVVTSADVAMEIMKNHDKVFSNRPQHIAPKILLYGCTEVGFGLYGKNWKEKRKLCVGELLNMKNVQSSHPIREEEVEELVNKLREASLNDACVNLSEMLISTINNIVCKCALGRKYGEASVGNFKELARKVMIYLTTFVVGDYFPSLSWIDVLSGKIGKIKDTFQALDGFFDQVIEERLALKKMENNQLKKKVFVDILLQLQEDGMLGFEFSNNDIKGLLMDMFVGGIDTTSAILEWTISELMRHPIIMKKAQEEVRRIVGNRSKVEENDINQMHYLKCVVKESLRLHPATPLIPPRETISSVNLKGYDIPEKTVVYVNAWAIQRDPKNWENPEEFMPERFEHNIIDFIGQDSQFIPFGFGRRGCPGMNFGVATVEYVLASLLCWFNWKLPTQTNLVKQNIDMNEVFGLVVTKKEPLHLKPITFLV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02568 535 Pfam Cytochrome P450 65 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PANTHER CYTOCHROME P450 71B11-RELATED 25 532 - -
Tsu04g02568 535 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 25 532 - -
Tsu04g02568 535 SUPERFAMILY Cytochrome P450 65 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Tsu04g02568 535 Gene3D Cytochrome P450 48 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 Coils Coil 358 378 - -
Tsu04g02568 535 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02568 535 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02568 Tsu-Chr4 28941123 28944967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02568 65 534 Cytochrome P450 AT3G26330 43.579 4.66e-132 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02568 K20617 - gmx:100803384 673.315