Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02567 ATGGCTCTCAAAAAATGGTCACATGAACTAATTATAGGAGCGTTTTGTTCTCCCTTTTTTCTATCTACTTTTTTCATTGTAAGTGTGTTCATTGTGTTTAACTTTGCAATTAGAAAACCCAAATCTAAATCAAAAACTAATCTAAATCAACTTCCATTTCCACCTAAACTACCTATCATCGGTAATCTTCATCAACTAGGCACACTTCCACACCGTTCTCTTAGGGACCTATCACTCAAATATGGCAACATGATGTTATTGCAATTGGGACAAAAACCAACTCCAACTCTAGTGGTTACATCAGCAGATGTAGCAATggaaatcatgaaaaatcatGATAAAGTTTTTTCAAACCGACCCCAACATATAGCTCCAAAAATCTTGTTGTATGGATGTAATGATGTTGGTTTTGGACTTTATggaaaaaattggaaacaaaaaagaaaattatgtgTTGGAGAACTTTTAAACATGAAAAATGTGCAATCATCTCATCCcattagagaagaagaagttgaagaGTTGGTGAATAAGCTAAGAGAAGCAAGCTTGAATGATGCATGTGTTAATCTAAGTGAAATGCTTATTTCAACAATAAACAATATTGTTTGTAAATGTACTCTTGGAAGGAAGTATGAAGAAGCTAGTGAAGGCTATTTGAATGTATTAGCAAGGAAGGTTATGATTTATCTTACAACTTTTGTTGTTGGAGATTACTTCCCTTCTTTGAGTTGGATTGATGTTCTTAGTGGAAAAATTGGAGAAATGAAGGATACTTTTCAAGCACTTGATGGTTTCTTTGATCAAGTGATTGAAGAACGTTTGGCTTTGAAGAAGATGGAAAATAATCAATTCATGAAAAAAGGGTTTGTGGATATTCTACTTCAACTCCAAGAAGATGGCATGCTTGGCTTTGAGTTCTCCAATAATGATATCAAAGCACTTCTAATggACATGTTTGTTGGAGCAAATGACACAACCTCATCAACATTAGAATGGACAATTTCAGAGCTGATGAGACATCCAACCATAATGAAAAAAGTACAGGAAGAAGTAAGAAGAGTTGTTGGAAATAAAccaaaagttgaagaaaatgaCATCAACCAAATGCACTATTTAAAGTGTGTAGTGAAAGAAAGTCTAAGGTTACGTCCAGTTACTCCTCTCATGGCTCCTCGAGAAACAATATCTAGTGTGAATCTAAAAGGGTATGCTATTCCTGAAAAAACAATGGTATATGTAAATTTATGGGCAATACAAAGAGACCCTAAGAATTGGGAGAACCCAGAAGAGTTCGTGCCAGAGAGATTTGAACACATCATAGTTGATTTCATAGGTCAAGATTTTCAGTATATCCCTTTTGGTTTTGGGAGAAGGGGGTGTCCTGGAATGAATTTTGGAGTAGCTAATGTTGAATATGTTCTTGCTAACCTTCTTTATTGGTTCAATTGGAATCTACCAACTGAAACAAATTTAGGTAAACAAGATATAGATATGAATGAGATATTCGGACTTGTTGTCACAAAGAAAGAACCTCTTCATCTTAAACCGGTAACATTTTTAGTTTAA 1569 0.3263 MALKKWSHELIIGAFCSPFFLSTFFIVSVFIVFNFAIRKPKSKSKTNLNQLPFPPKLPIIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQKPTPTLVVTSADVAMEIMKNHDKVFSNRPQHIAPKILLYGCNDVGFGLYGKNWKQKRKLCVGELLNMKNVQSSHPIREEEVEELVNKLREASLNDACVNLSEMLISTINNIVCKCTLGRKYEEASEGYLNVLARKVMIYLTTFVVGDYFPSLSWIDVLSGKIGEMKDTFQALDGFFDQVIEERLALKKMENNQFMKKGFVDILLQLQEDGMLGFEFSNNDIKALLMDMFVGANDTTSSTLEWTISELMRHPTIMKKVQEEVRRVVGNKPKVEENDINQMHYLKCVVKESLRLRPVTPLMAPRETISSVNLKGYAIPEKTMVYVNLWAIQRDPKNWENPEEFVPERFEHIIVDFIGQDFQYIPFGFGRRGCPGMNFGVANVEYVLANLLYWFNWNLPTETNLGKQDIDMNEIFGLVVTKKEPLHLKPVTFLV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02567 522 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 Gene3D Cytochrome P450 35 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 12 519 - -
Tsu04g02567 522 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Tsu04g02567 522 SUPERFAMILY Cytochrome P450 52 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02567 522 PANTHER CYTOCHROME P450 71B11-RELATED 12 519 - -
Tsu04g02567 522 Pfam Cytochrome P450 52 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02567 Tsu-Chr4 28935963 28938545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02567 43 521 Cytochrome P450 AT3G26320 41.529 1.93e-131 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02567 K20617 - gmx:100803384 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02567 04 28935963 28938545 Tsu03g02324 03 26268690 26270687 PCT