Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02566 ATGCATGATTTGCGCATGATCCACACTGACCTAAAGCCTGAAAACATACTTCTTGTTTCATCAGACTATGTTAAAGTTCCTGACTACAAGATTTCATCTAGATCGCCAAACTCATATTTCAAGAAAGTGCCCAAGTCTAGTGCTATCAAGGTTATTGATTTTGGTAGTACCACATATGAGCGAGTAGATCAGAGTTACATTGTATCAACTCGTCATTATAGAGCACCTGAAGTTATCCTTGGTCTTGGCTGGAGTCATCCATGTGATATATGGAGTGTGGGATGTATATTAGTCGAGTTATGCACGGGTGAGGCTTTGTTTCAGACTCATGAAAATTTAGAGCACCTTGCCATGATGGAGAGGGTACTTGGTCCACTACCAATGCATATGTTGAAGAGAGTTGACCGACATGCTGAGAAGTATGTTAGAAGAGGTAAACTGGACTGGCCGGTGGGTGCAACCTCGAGGGAGAGTATTAAAGCTGTGACAAAGCTCCCTAGACTACAGAACCTTATAATGCAGCACGTTGATCATTCAGCTGGTGATCTGATTCATCTGTTGCAAGGGTTACTTAGATATGACCCATCTGAAAGAATAACAGCAAAGGAAGCCTTGAGACATTCCTTTTTTATGAGGAGATCACATTAG 648 0.4182 MHDLRMIHTDLKPENILLVSSDYVKVPDYKISSRSPNSYFKKVPKSSAIKVIDFGSTTYERVDQSYIVSTRHYRAPEVILGLGWSHPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPMHMLKRVDRHAEKYVRRGKLDWPVGATSRESIKAVTKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERITAKEALRHSFFMRRSH 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02566 215 PANTHER KINASE AFC1 1 213 - -
Tsu04g02566 215 SUPERFAMILY Protein kinase-like (PK-like) 1 211 IPR011009 -
Tsu04g02566 215 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02566 215 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 213 - -
Tsu04g02566 215 SMART serkin_6 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02566 215 Pfam Protein kinase domain 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02566 215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 6 18 IPR008271 GO:0004672|GO:0006468
Tsu04g02566 215 Gene3D Transferase(Phosphotransferase) domain 1 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02566 Tsu-Chr4 28921311 28925524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02566 1 210 MAP Kinase Gene Family AT3G59790 27.488 6.60e-20 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Tsu04g02566 Pkinase 2.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02566 K08287 - gmx:100804452 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02566 04 28921311 28925524 Tsu04g02566 04 28921311 28925524 ECH