Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02561 ATGGATTTTACTGAATTACTTGGTACTTTTGTTGTTGGAGATTATGTTCCGTGGCTTGATTGGTTGACACATGTTTCTGGATTTTATTCACGAGCAAGAAAAGTTGCTAAAAAGCTTGATGATCTTTTGGAGGATGTAGTTGAAGATCATATTACTCGTCAGAAAGGAGGTGAGGATGGTTTAGATAGTGATGAGCATGGTGATTTTGTTGATGTTTTGCTTTGGATCCAAAGGACAGAGTCACTTGGCTTTCCTATTGACAGAACAGTCATAAAGGCTTTGTTACTGgACATGTTTTCTGCTGGTACAGACACTATATCCACCTTGTTAGAGTGGGCAATGACAGAACTCTTAAGACATCCAAATATTATGAAGAAATTGcaagaagaaacaaaaagtgTAGCTGGTGATAGAACAAACATAACTGAAGATGATTTGGGTAATATGAAATACTTACAAGCAGTGATTAAAGAAACACTACGATTACATCCACCAATCCCATTACTAGTCCCCCGAGAAAACCGACAAGATATCAAATTAAAGGGTTACCATATCAAAGCCGGAACACGAGTAATTATAAATGCTTGGGCCATTGCAAGAGATCCCACATATTGGGATCAACCCGAAGAGTTCAAGCCGGAGAGATTCTTGAATAATTCAATAGATATTAAAGGAAATGATTTTGAATTGATTCCATTTGGAGCAGGAAGAAGGGGTTGTCCAGGGATAGTTTATGCTATGGCTGCCAATGAACTCGTGTTAGCAAACCTTGTACATCAATTTAAATGGGAATTACCTGATGGTGTTGAAGGATTGGAAACTTTGGATATGTctgaaacatttggtttaaccATGCATAGAAAGACTCCTCTTGTAGCTGTTGCAACCCTTAATAATAAGTAA 903 0.361 MDFTELLGTFVVGDYVPWLDWLTHVSGFYSRARKVAKKLDDLLEDVVEDHITRQKGGEDGLDSDEHGDFVDVLLWIQRTESLGFPIDRTVIKALLLDMFSAGTDTISTLLEWAMTELLRHPNIMKKLQEETKSVAGDRTNITEDDLGNMKYLQAVIKETLRLHPPIPLLVPRENRQDIKLKGYHIKAGTRVIINAWAIARDPTYWDQPEEFKPERFLNNSIDIKGNDFELIPFGAGRRGCPGIVYAMAANELVLANLVHQFKWELPDGVEGLETLDMSETFGLTMHRKTPLVAVATLNNK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02561 300 SUPERFAMILY Cytochrome P450 2 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 Gene3D Cytochrome P450 1 298 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PRINTS E-class P450 group I signature 90 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PRINTS E-class P450 group I signature 110 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PRINTS E-class P450 group I signature 153 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PRINTS E-class P450 group I signature 194 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PRINTS E-class P450 group I signature 230 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PRINTS E-class P450 group I signature 240 263 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 233 242 IPR017972 GO:0005506|GO:0016705
Tsu04g02561 300 Pfam Cytochrome P450 14 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 299 - -
Tsu04g02561 300 PRINTS P450 superfamily signature 101 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PRINTS P450 superfamily signature 154 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PRINTS P450 superfamily signature 231 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02561 300 PANTHER CYTOCHROME P450 71B11-RELATED 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02561 Tsu-Chr4 28864516 28866834 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02561 3 296 Cytochrome P450 AT3G48270 51.014 8.81e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02561 - - mtr:MTR_4g104540 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02561 04 28864516 28866834 Tsu04g02561 04 28864516 28866834 ECH