Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02546 ATGACGAGGATGTCCTTGATTTGTTGCAGGTGTACGGAGGATGAAATGGACAAATATGGAATCCACCTACTTGCACTATCTCACGTGTACAACGTGCCACAACTGAAACAGAAATGCATCAAAGGCCTTGTTCAACGGTTAACCGTAGAAAACGTGGTGGATGTACTCCAACTCGCGAGACTCTGCGACGCACCGGATCTCCGTCTCCGTTGTATGAAACTACTAGCCAATCACTTCAACGCGGTGCAAAAATCCGAAGGGTGGAAGTTCCTTACCAAACATGATCCCTGGCTTGAACTCGATATTCTTCACTTCATGGACGAAAGTGAAACAAGGAGAGAGAAATTGAGGAAGCATAGGGAGGAGCAAGGGTTGTATGCGGAATTGAGTGAAGCAATGGAATGTTTGGAACATATATGTACCGAAGGTTGCACCGACGTTGGGCCTTATCATGTGGAGGTGGATAGAGAGAGGAAGCCTTGTAGCAAATTCTCAACTTGTCAAGGTCTTCAGCTTCTGATTCGCCATTTTGCGACGTGTAAGAGGAGGGTGAAGGGAGGTTGTTGGCGGTGCAAGCGTATGTGGCAGCTGTTTAGATTGCATTCATATGTTTGTCAACAAACTGATGATTCTTGCAATGTTCCTCTTTGCAGACAATTTCAACTGAAAATGGAGCAAGAGAAAAGGAAAGATGATCCCAAGTGGAAACTACTAGCAAGAAAGGTGGCCTCAGCTAAAGTCATGTTTTCTTTGTCTTTGCCTAAGAGAAAGAGGGATGAAGAAATGAGAGTGACCATAGATAAACGTGGGATAAGATGTTTTGGTTACAATGAATATTGTAACAATGTACAAGACAATAGATGCATTTCATGTTGA 876 0.4372 MTRMSLICCRCTEDEMDKYGIHLLALSHVYNVPQLKQKCIKGLVQRLTVENVVDVLQLARLCDAPDLRLRCMKLLANHFNAVQKSEGWKFLTKHDPWLELDILHFMDESETRREKLRKHREEQGLYAELSEAMECLEHICTEGCTDVGPYHVEVDRERKPCSKFSTCQGLQLLIRHFATCKRRVKGGCWRCKRMWQLFRLHSYVCQQTDDSCNVPLCRQFQLKMEQEKRKDDPKWKLLARKVASAKVMFSLSLPKRKRDEEMRVTIDKRGIRCFGYNEYCNNVQDNRCISC 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02546 291 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 6 275 - -
Tsu04g02546 291 Gene3D - 46 119 - -
Tsu04g02546 291 CDD BACK 48 95 - -
Tsu04g02546 291 SUPERFAMILY TAZ domain 121 221 IPR035898 -
Tsu04g02546 291 SMART TAZ_2 123 218 IPR000197 -
Tsu04g02546 291 Pfam TAZ zinc finger 130 217 IPR000197 -
Tsu04g02546 291 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 6 275 IPR044513 -
Tsu04g02546 291 Gene3D TAZ domain 120 246 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02546 Tsu-Chr4 28705638 28709213 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tsu04g02546 zf-TAZ 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02546 - - cam:101496955 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02546 04 28705638 28709213 Tsu04g02546 04 28705638 28709213 ECH