Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02542 ATGAGAGGTTCAAACATGGAATACTACAAACCAGTAATGGTTATGGTGTTAATACAATTTATATATTCAGGTATGACTCTTGGCACAAGAATTGGACTTTTGGAGGGTATGAGCCCAAGGGTATTTGTGGTATATCGTCATGCTTTTGCAACCATTTTTCTTGCTCCCATTGCTTATTTATCTGGgaGAAACTCTGCCTCCTATTCCTTAAACTTAAGGAGTTTTTACCTGATATTCTTGACCTCACTAATTGGTATAACATTgaatcaaaatttatattttgaggGTCTATATCTTGTTCCTTCTTCAATTGCAAGTGCCATGACCAATCTTATTCCGGCAATCACATTTATAATAGCATCATTTGTAGG 371 0.3396 MRGSNMEYYKPVMVMVLIQFIYSGMTLGTRIGLLEGMSPRVFVVYRHAFATIFLAPIAYLSGRNSASYSLNLRSFYLIFLTSLIGITLNQNLYFEGLYLVPSSIASAMTNLIPAITFIIASFV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02542 123 PANTHER WAT1-RELATED PROTEIN 11 121 IPR030184 GO:0016021|GO:0022857
Tsu04g02542 123 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 122 - -
Tsu04g02542 123 Pfam EamA-like transporter family 11 122 IPR000620 GO:0016020|GO:0016021
Tsu04g02542 123 PANTHER WAT1-RELATED PROTEIN 11 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02542 Tsu-Chr4 28643596 28645704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02542 5 120 Nodulin-like Gene Family AT4G30420 61.864 9.98e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02542 - - gmx:100812331 168.703